Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0007 ATGTGGAGGCTGAAGATAGCAGATGGTGGAAATGATAAAGCATACATATTCAGCACAAACAATTTTGTGGGGAGGCAGACATGGGAGTTTGATCCTGAAGCAGGCACTCCCGAGGAACGGGCCCAGGTTGAAGCAGCTCGTCAGGATTTCTATCATAACCGCTTCAACTTCAAGCCCTGTGCTGACCTCCTTTGGCGGTTTCAGATTCTCAGAGAAAATAACTTCAAACAAACGATACCTAGTGTGAAGATAGACGATGGAGAGGAAATAACATACGAAAAAGTCACAACCGCTGTCAGAAGGGGCGCACATCACCTAGCGGCATTGCAGACCAGTGATGGCCATTGGCCTGCGCAAATTGCAGGTCCTCTGTTTTTTCTTCCTCCTTTGAATGAGGATGGAGGATGGGGATTACACATAGAAGGTCATAGCACTATGTTTTGTACTGCCCTAAATTATATATGCATGCGAATTCTTGGAGAAGGACCTAATGGAGGCCATGACAATGCTTGTGTTAGAGCAAGAAAATGGATTCAAGATCATGGTGGTTTAACACATATACCTTCATGGGGAAAAACTTGGCTTTCGATACTAGGTGTATTTGATTGGTGTGGAAGCAATCCAATGCCTCCCGAGTTTTGGATCCTTCCTTCGTTTCTTCCTATGCATCCTGCTAAGATGTGGTGTTATTGTCGATTGGTATACATGCCTATGTCTTATTTATATGGAAAGAGATTTGTGGGTCCAATCACACCACTCATCTTACAATTAAGAGAAGAGCTATTTACTCAACCTTATGAATCAGTTAATTGGAAGAAAGCACGTCACCAATGTGCAAAGGAAGATCTTTACTATCCTCATCCTTTGATACAAGACCTAATATGGGATAGTTTATACATATTCACCGAGCCACTGCTTACTCGTTGGCCTTTCAACAAGTTGATCAGAGAAAAAGCCCTTCAAGTAACAATGAAACATATTCATTACGAAGATGAGACTAGTCGATACATAACCATTGGTTGTGTAGAAAAGGTTTTATGTATGCTTGCTTGTTGGGTGGAAGATCCAAACGGAGATGCTTTCAAGAAGCATCTTGCAAGAATCCCAGATTATTTATGGGTTTCTGAAGATGGAATGACCATGCAAAGCTTTGGTAGCCAAGAGTGGGATGCTGGCTTTGCTGTTCAAGCTTTACTTGCCACCAACCTAATTGAAGAAATTGGTCCTACCCTTGCAAAAGGACATGATTTCATCAAGGAGTCTCAGGTGAAGGATAACCCTTTTGGAAATTTTAAGAGCATGTATCGTCATATTTCTAAAGGATCTTGGACATTCTCTGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTAAAGAGTAAAAAAGGTGGTTTATCAGCATGGGAGCCTGCAGGAGCTCAAGAGTGGTTAGAATTACTAAATCCCACCGAATTTTTCGCGGACATTGTAGTTGAACATGAATATGTTGAATGCACGGGATCTGCAATTCAAGCTTTAATTTTGTTCAAGAAGCTATATCCAGGACATAGGAAAAAAGAGATAGAGAATTTCATTATTAATGCAGTTCGATTCCTTGAAGATACACAAACAACCGATGGTTCATGGTATGGAAATTGGGGAGTTTGCTTCACTTATGGCTCTTGGTTTGCACTTGGTGGTTTAACAGCGGCCGGCAAGACTTATACCAATTGTCTTGCAATTCGCAAAGCTGTGAAATTTTTACTTAGAACACAAAGGGAGGATGGTGGATGGGGAGAGAGTTATCTTTCAAGTCCAAAAAAGATATATGTACCTCTAGAAGGAAATCGATCAAATGTTGTACATACAGCGTGGGCTCTTATGGGATTAATTCATGCGGGACAGGTTCGTTCTTGA 1908 0.414 MWRLKIADGGNDKAYIFSTNNFVGRQTWEFDPEAGTPEERAQVEAARQDFYHNRFNFKPCADLLWRFQILRENNFKQTIPSVKIDDGEEITYEKVTTAVRRGAHHLAALQTSDGHWPAQIAGPLFFLPPLNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPNGGHDNACVRARKWIQDHGGLTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELFTQPYESVNWKKARHQCAKEDLYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLIREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARIPDYLWVSEDGMTMQSFGSQEWDAGFAVQALLATNLIEEIGPTLAKGHDFIKESQVKDNPFGNFKSMYRHISKGSWTFSDQDHGWQVSDCTAEGLKSKKGGLSAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALILFKKLYPGHRKKEIENFIINAVRFLEDTQTTDGSWYGNWGVCFTYGSWFALGGLTAAGKTYTNCLAIRKAVKFLLRTQREDGGWGESYLSSPKKIYVPLEGNRSNVVHTAWALMGLIHAGQVRS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0007 635 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 130 IPR018333 GO:0005811|GO:0016104|GO:0016866
Aed2g0007 635 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 462 634 IPR018333 GO:0005811|GO:0016104|GO:0016866
Aed2g0007 635 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 131 463 IPR018333 GO:0005811|GO:0016104|GO:0016866
Aed2g0007 635 Pfam Squalene-hopene cyclase N-terminal domain 131 374 IPR032697 -
Aed2g0007 635 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 322 633 IPR008930 -
Aed2g0007 635 CDD SQCY_1 99 635 IPR018333 GO:0005811|GO:0016104|GO:0016866
Aed2g0007 635 Gene3D - 467 635 - -
Aed2g0007 635 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 131 463 IPR018333 GO:0005811|GO:0016104|GO:0016866
Aed2g0007 635 Gene3D - 89 385 - -
Aed2g0007 635 PANTHER LUPEOL SYNTHASE 1 1 130 - -
Aed2g0007 635 PANTHER LUPEOL SYNTHASE 1 462 634 - -
Aed2g0007 635 PANTHER LUPEOL SYNTHASE 1 131 463 - -
Aed2g0007 635 ProSitePatterns Terpene synthases signature. 543 557 IPR002365 GO:0016866
Aed2g0007 635 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 131 381 IPR008930 -
Aed2g0007 635 Pfam Squalene-hopene cyclase C-terminal domain 460 634 IPR032696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0007 Aed-Chr2 106612 115369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0007 K15813 - gmx:547702 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0007 2 106612 115369 Aed2g0007 2 106612 115369 ECH