Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0004 ATGGCGGCAACCCAACCACCGCAGGGTCCGGATCGTACCACCGGTCATTCAAGGGAGACCACTAGTCAATCAGGATCTTTAGGCTCAGGTGGAGATTGTCCTCTGTATTCTCCTAATGTCTATGCTCCCCAAGCGCAGGCTTTCTACTATAGAGGTTTTGACAATGGCAATGGTGAATGGGATGAATATTCTTCATATGTCAATTCTGAGGGATTAGACATTGGATCTCCTGGTGTCTACAATGAGAATCCATCTCTTATTTTCCATTCTGGGTATGGCTTCAACCCACAAATGCCTTATGGACCATATTCCCCAGTTACCACACCTTTGCCCTCTGTAGGTGGAGACACACAGTTATATTCCCCTCAGCAATTTCCATACACTGGGCCACCTTATTATCATCAGCTGGTTCCTCCTAGCGTACCATATCTTAATTCACCTACTCCAGTTTCACAGCCAGAGCTCACCAACCTGGTAGGTATTGACCAACAAGTTGATAACATGTTTTTTGGACCAAGAGCGGGCTATCCATCAGTGGGATCTTTTGGTAGAGGCAACTTTCCTGTAGCACCTGGTTCCTTCGGCTTTCATGAATCCCAACAAGGATTTGAAGGATCAAGATCTGGTGGAATCTGGTCAGACTGCTCAAAACCCTCGGAAAGACAAAGATCTTTGATGCCTCTATCGCCATCTGTTTCTCCACAGCCAATGGGCTCACTTGGGTCATTTGGGCCAAGTGTTGGAATGGCTTCTCATCAACAGCAATCGTTGTATGGGTTTGGATCTGGTTCAAACTCCTATGGTAGAGGCTACCTGCCTAACCAGGGCTCTAGCTTTGGAGGCACTTCCATTTCCAATCTTAATGATAGGAGTTGTGCTTCGCTTGAAAATAGCAGGCAGCAAGGGAGGCCAATTGCTTCTCTTTGCAATTGTAATGGTACTCTTGATATCCTTAGTGAGCAGAACCGAGGACCAAGGGCCTCGAAGTTGAAAAATCAAATATCAGCCGAAAACAATTCTGTGGATAGTAGTAAAAATAGTGCATCTACTGCCAAGATCCAAAATGAATCACTCAATCGGTCAGATTTTGCCACAGATTACACGGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTTCACAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAATGGAAACAGAAAGTTAGATGCTGCATATCGCCAAGCAATGGAGAAGCAAGATGCCTGTCCCATATTTCTCTTTTTTTCGGTAAATGCTAGCGCTCAGTTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTCGACAAGAGTGTGGACTTCTGGCAGCAAGATAAGTGGAGTGGGCAGTTTCCCGTGAAGTGGCACATAATTAAAGATGTTCCAAACAGTCAGTTTCGTCACATTGTACTTGAAAATAATGATAACAAGCCTGTGACTAACAGTCGAGATACTCAGGAGGTGAAGTTGCCTCGGGGGATTGAAATGTTGACCATTTTTAAAAACTATGAAACTGATGTGTCTATCCTGGATGATTTTGATTTCTATGAAGACCGGCAGAAGGCTATGCAAGAACGGAAGGCAAGGCAACAAAGCAGCATGATGGCTACTGGATTAGTTGGAGAAAATGAACTTAGGAGTTCTGCTAACACTACTGGTGATTTCATGAAGCAGATGTCAAAAAGCTTTGCTCTAGTCGTCCGCTTAGATGAGAATAACAAGGAAGTTGCTGCGGATAGAGATAGTTTAGCTTCTCATGGCCCCATTGGTAATATAGTTAAACCCGATGATAGTCAACCAGTGACTGCCTCTTCAACTCAAACCAGCTAG 1851 0.4414 MAATQPPQGPDRTTGHSRETTSQSGSLGSGGDCPLYSPNVYAPQAQAFYYRGFDNGNGEWDEYSSYVNSEGLDIGSPGVYNENPSLIFHSGYGFNPQMPYGPYSPVTTPLPSVGGDTQLYSPQQFPYTGPPYYHQLVPPSVPYLNSPTPVSQPELTNLVGIDQQVDNMFFGPRAGYPSVGSFGRGNFPVAPGSFGFHESQQGFEGSRSGGIWSDCSKPSERQRSLMPLSPSVSPQPMGSLGSFGPSVGMASHQQQSLYGFGSGSNSYGRGYLPNQGSSFGGTSISNLNDRSCASLENSRQQGRPIASLCNCNGTLDILSEQNRGPRASKLKNQISAENNSVDSSKNSASTAKIQNESLNRSDFATDYTDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQAMEKQDACPIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLPRGIEMLTIFKNYETDVSILDDFDFYEDRQKAMQERKARQQSSMMATGLVGENELRSSANTTGDFMKQMSKSFALVVRLDENNKEVAADRDSLASHGPIGNIVKPDDSQPVTASSTQTS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0004 616 Pfam YT521-B-like domain 370 508 IPR007275 GO:0003723
Aed2g0004 616 MobiDBLite consensus disorder prediction 198 248 - -
Aed2g0004 616 MobiDBLite consensus disorder prediction 1 35 - -
Aed2g0004 616 MobiDBLite consensus disorder prediction 1 30 - -
Aed2g0004 616 MobiDBLite consensus disorder prediction 199 248 - -
Aed2g0004 616 ProSiteProfiles YTH domain profile. 370 507 IPR007275 GO:0003723
Aed2g0004 616 MobiDBLite consensus disorder prediction 322 349 - -
Aed2g0004 616 MobiDBLite consensus disorder prediction 584 616 - -
Aed2g0004 616 Gene3D ph1033 like domains 345 522 - -
Aed2g0004 616 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 12 592 IPR045168 -
Aed2g0004 616 PANTHER EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 12 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0004 Aed-Chr2 70779 80665 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0004 K20102 - gmx:100816860 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0004 2 70779 80665 Aed2g0004 2 70779 80665 ECH