Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2572 ATGGGCCTAGTTTGCAGCAACAGAGAGGAAATGCAGAAAATGAAGAACCTTGGTAGCATTGGAAGCAGTGGAAGGCTATCAGCAGAAGAATATGAGGATGAGGAGATTTCAAAACTGGCCATCTCCACATTTCAATCTAAGGAAGAGGAGATTGAGAGGAAAAAGATGGAAGTAAGAGAGAAAGTTGAACTTCATCTTGGTCGTGCTGAAGAAGAGACTAGGCGTTTGGCACACATTTGGGAAGAGCTTGAAGTGCTGGATGATCCCATGAGGAAGGAAGTTGCAATGGTACGCAAGAAGATTGACTTGGCTAACAGAGATTTAAAGCCACTGGGACTTAACTTCCAAAAAAAGGAGAAAGAGTATAAAGAAGCCATGGAAGCTTTCAACGAAAAGAACAAAGAGAAGACTCATCTAGTAGCCACACTAGTTGAGATGCTGACTGAGAGTGAAAGACTGAGGATGAAGAAACTTGAAGAGCTATGCAAGACTATAGAGTCTCTGTCACTGAAAAAGTGA 519 0.422 MGLVCSNREEMQKMKNLGSIGSSGRLSAEEYEDEEISKLAISTFQSKEEEIERKKMEVREKVELHLGRAEEETRRLAHIWEELEVLDDPMRKEVAMVRKKIDLANRDLKPLGLNFQKKEKEYKEAMEAFNEKNKEKTHLVATLVEMLTESERLRMKKLEELCKTIESLSLKK 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2572 172 Pfam Transcriptional activator 15 167 IPR007033 -
Aed1g2572 172 Coils Coil 41 61 - -
Aed1g2572 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 168 - -
Aed1g2572 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 168 IPR007033 -
Aed1g2572 172 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2572 Aed-Chr1 21375400 21376776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2572 - - gmx:100794044 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1951 2 24079359 24082035 Aed1g2572 1 21375400 21376776 ECH
Aed1g2572 1 21375400 21376776 Aed1g2572 1 21375400 21376776 ECH