Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2358 GCTGGGAACATTCGAACTGGTTCTCTTCTGGACACAGCACGAACTGGGTTGGAAAAAAGGAACCAGATTCTCAAGAACCGTTTCCTTCTTAGCTTCTCTCATGATTGGGGCTTCGGTTTTGTTTTGTATCGTTTGCAACAACAGAAGAAAGATCTCAAGCATATGGACATAAAGTCTCAGGGTGATAAGTTTTATGGAGCTTCTTCTGAGGAGGATGAGGATGGAAACGAGACGTCGCAAGTTGCTTCTTCTTCATCAAGAAGAGGTTGGGAACATTGCATCACAGTCCCTGTTGGAACTGAGAGGAATCCACTTAGAGTTGATGATGAGATTTTTCTTTCTAGATCAATGACAGAAAAGAGGGAAATCCCTAGGCAGGACACAATATTGGACAGGCTGTCTGAGAAGGCGAAGCAACTGATTACTAAACTAGTGAAGATACAAAATGATGGCACTGTTGAAGTTGATATAGAAATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGCAGAGTTAACAGTGAGTGAAAGTCTTAGTTCAGAATCAAAAAAATCTGTTCCACGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGAGTATGGTCATCATGTTAGGCTGGCAACTCATGATAATTTCAAAACATTTGTAAAGTCAGCTGGTGTAGATTTCTATCCTCTGGGTGGTGATCCTCGTGTATTGGCAGGATGTAAGAGATCTGAAATGGATAAGGATGTATCATATATGGCAAGGAATAAAGGTTTAATCCCTTCTGGACCGGCTGAAATATCTATCCAAAGAAAGCAGCTGAAGGCCATCATTGATTCCATTCCTCCAGCATGCACAGCACCTGATATGGAAACTGGTGTTCCTTTCAGAGCTCAAGCTATTATTGCCAATCCTCCTGCTTATGGACATGTACATGTTGCTGAGGCCCTTGGAGTGCCCCTCCATATCTTCTTCACAATGCCATGGACGCCAACATATGAGTTCCCCCACCCTTTGGCACGTGTTCCTCAAAGTCCCGGTTATTGGCTGTCCTATATAATTGTGGATCTACTGATATGGTGGGGAATGCGAAGAATTATCAATAACTTCAGGAAAACAACACTGAAGCTTGCTCCCATTGCATACTTTAGTATGTACCGTGGATCCATATCTCATTTACCGACTAGCTATATGTGGAGTCCTCATGTTGTTCCAAAACCAAGTGACTGGGGCCCTTCAGTTGATGTTGTTGGTTATTGTTTCTTGAGTCTTGCATCAAAGTATCAAGCTCGGGAAGATTTCGTCCAATGGATTAAAAAAGGACCACCTCCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGAAGATACTAAAGGAACAACAGATGTTATATTGGAGGCACTAAAAGATACAGAACAACGAGGAATTATTGACCGGGGTTGGGGCAATCTAGGGAATTTGGCAGAACTTTCTGACAATGTTTTCCTTCTGGAGGAATGCCCTCACGATTGGTTGTTTCCTCAATGTTCTGCTGTGGTGCATCATGGTGGAGCTGGAACCACAGCTACAGGATTAAGAGCTGGGTGTCCAACAACCATAGTTCCATTCTTTGGAGATCAGTTCTTTTGGGGAGATAGAATATATCAGAAAGAGTTGGGACCAGCCCCAATCCCAATATCTCAGCTCAACGTTGAGAATTTATCAAACGCCATAAGATTCATGCTCCAGCCAGAGGTGAAATCTCGAGCAATGGAAATTGCTAGATTGATTGAGAATGAAGATGGGGTTGCCACTGCGGTCGATGCATTTCATCGACATCTGCCCGATGAATTACCGCTGCCAACTCCAAGTCCAATTCCATTGGAGGAGGACTACTTGAATCCTTTGCAGTGGTTTTTTCTCAAACTTGGAAGGTTCTGTTGTGCACCTTGTGGGGGTGTGTAG 1950 0.4333 AGNIRTGSLLDTARTGLEKRNQILKNRFLLSFSHDWGFGFVLYRLQQQKKDLKHMDIKSQGDKFYGASSEEDEDGNETSQVASSSSRRGWEHCITVPVGTERNPLRVDDEIFLSRSMTEKREIPRQDTILDRLSEKAKQLITKLVKIQNDGTVEVDIEMSASVAPELLELQSFAELTVSESLSSESKKSVPRLQIVILVVGTRGDEYGHHVRLATHDNFKTFVKSAGVDFYPLGGDPRVLAGCKRSEMDKDVSYMARNKGLIPSGPAEISIQRKQLKAIIDSIPPACTAPDMETGVPFRAQAIIANPPAYGHVHVAEALGVPLHIFFTMPWTPTYEFPHPLARVPQSPGYWLSYIIVDLLIWWGMRRIINNFRKTTLKLAPIAYFSMYRGSISHLPTSYMWSPHVVPKPSDWGPSVDVVGYCFLSLASKYQAREDFVQWIKKGPPPLYFGFGSMPLEDTKGTTDVILEALKDTEQRGIIDRGWGNLGNLAELSDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLRAGCPTTIVPFFGDQFFWGDRIYQKELGPAPIPISQLNVENLSNAIRFMLQPEVKSRAMEIARLIENEDGVATAVDAFHRHLPDELPLPTPSPIPLEEDYLNPLQWFFLKLGRFCCAPCGGV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2358 649 Gene3D Glycogen Phosphorylase B; 423 592 - -
Aed1g2358 649 Gene3D Glycogen Phosphorylase B; 195 597 - -
Aed1g2358 649 Pfam Glycosyltransferase family 28 N-terminal domain 206 337 IPR004276 GO:0005975|GO:0016758|GO:0030259
Aed1g2358 649 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 195 609 - -
Aed1g2358 649 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 55 647 - -
Aed1g2358 649 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 448 591 IPR002213 GO:0008194
Aed1g2358 649 Coils Coil 130 150 - -
Aed1g2358 649 MobiDBLite consensus disorder prediction 64 86 - -
Aed1g2358 649 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1 55 647 - -
Aed1g2358 649 CDD GT1_Gtf-like 195 608 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2358 Aed-Chr1 19628795 19637515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2358 206 649 Glycosyltransferase AT1G43620 75.561 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2358 K05841 - gmx:100800091 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0728 7 5495709 5502755 Aed1g2358 1 19628795 19637515 PCT