Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2309 ATGAAGAAAAAAGCCATGAAGGCAGTTTCTACTCTTTCAGGGGTTGAATCAGTGTCAGTGGATATGAAGGAGCCGAAATTGAGCTTAGTTGGAGAAATCGACCCTGCGGCTGTAGTGAGCAAGCTGAGAGAGCTGTGTCACACTGACATTAACATAGTCTCTGTTGAGAAAAAGAAAAAGAAAAAGGATCAAAATCAGAACTTGGCTGATGATATCAACAACGAAGCCTATGATGATGAGATGAGACAACCACATAATTACTACTATTACTCAAGTAAAGTTGTGCTAAATGTGGAACTACATGATAACAAAATTAAGAAGAAAGCCATGAAGGTAGTCTCCAATCTTTCAGGGGTTGAATCAGTGTCAGTGGATATGAAAGAGAAGAAACTGACCTTAATGGGAGACATCGACCCAGTGGTTGTAGTGGGGAAGCTGAGGAAGCTGTGTCACACTGAAATAGTCTCAGTTGGACCAGCCAAGGAAAAGAACAATAATAATAAAGATAAAGAGGAGAAGGAGAAGCCAGCAGCAGCGGATAACCATGTCTACGAAGCCTACTACCACAACATCCATTATCAGATGAGGCAACCAAATTATTATTACACAAGTGTCGAAGAGAATCCTAATGCCTGTGTCATTTCCTAA 648 0.4074 MKKKAMKAVSTLSGVESVSVDMKEPKLSLVGEIDPAAVVSKLRELCHTDINIVSVEKKKKKKDQNQNLADDINNEAYDDEMRQPHNYYYYSSKVVLNVELHDNKIKKKAMKVVSNLSGVESVSVDMKEKKLTLMGDIDPVVVVGKLRKLCHTEIVSVGPAKEKNNNNKDKEEKEKPAAADNHVYEAYYHNIHYQMRQPNYYYTSVEENPNACVIS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2309 215 Coils Coil 55 75 - -
Aed1g2309 215 Gene3D - 1 61 - -
Aed1g2309 215 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 78 - -
Aed1g2309 215 SUPERFAMILY HMA, heavy metal-associated domain 92 150 IPR036163 GO:0046872
Aed1g2309 215 Pfam Heavy-metal-associated domain 96 148 IPR006121 GO:0046872
Aed1g2309 215 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 92 214 - -
Aed1g2309 215 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 92 214 - -
Aed1g2309 215 Gene3D - 90 163 - -
Aed1g2309 215 MobiDBLite consensus disorder prediction 160 179 - -
Aed1g2309 215 MobiDBLite consensus disorder prediction 163 179 - -
Aed1g2309 215 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2309 Aed-Chr1 19151591 19153055 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2309 - - gmx:100793345 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2309 1 19151591 19153055 Aed1g2309 1 19151591 19153055 ECH
Aed7g0641 7 4743496 4744657 Aed1g2309 1 19151591 19153055 PCT
Aed1g2309 1 19151591 19153055 Aed7g0643 7 4753169 4755008 PCT