Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2295 ATGGATTCAGAGACGAGTACTAGAGGTGTTTCTTCGTCGTGGGTGAAGTATTTGCAAATGGGGATATGGTGGTTCTCAGTGTTGATCTTTGTTGGGTATGTTATGATTTGGATTGTGATGCCCACCAACATCTTCTTTCCACATTGGTTCCGAGACATTCAAGCAAAAGCAGATTCAATTTACTTTGGTCAACAAGGGACAACCATTCTCATTTACACGTTTCCAATTTTATTAATAGCAACTTTAGCCAGTCTATACTTTTATTTGGAACAAAAACGTTCTGATCATAATACTCAAAGCAATGTGGGATTCTTAAGATTGGCACCATGGAAAAGACCATTGCTTGTAAATGGTCCTCTTGGGATAATCACTATGACAGAGCTCTCTTTCATTATCATGTTTGTTTTACTATTAATCTGGTCCTTATGCTTCTACATACATCAAATGTTTGCAACCGTGGCACTAGATGCAGCTAACGAAAGAGTGCAAGTGTGGGAAGTCAAGCTTGAATATTCAGCCCTTGCTTTTGGCATTGTTGGGTATATTTGCTTGGCCTTATTGTTCTTTCCTGTCTCAAGAGGGTCTTCAATTTTGCGGTTCATTGGCTTAACTTCAGAGGCAAGCATCAAGTATCATATCTGGCTAGGACACACTGCAATGACCCTCCTCACAGCCCATGGTCTAGGTTATATTCTTTTTTGGGCCCAGACACATCAAATCTTAGAGATATTCAAATGGAGCAAAATTGGTGTCTCAAATGTGGCTGGAGCAGTTGCTCTACTTGCTGGATTAATCATGTGGGCTACTACCTTACCTTCCATAAGGCGAAAAGCTTTTGAGCTTTTCTTCTACACTCACTACCTTTACATTGTCTTTGTAGTCTTCTTTGTGTTTCATGTGGGATTTTCCAACTCTTGCATAGTGCTCCCAGGATTTTACCTATTCATGATCGACCGGTACCTAAGATTCCTACAATCCCAGCAGAAAATTCGGTTGCTTTCCGCCCGAGTTTTGCCTTGTGAAGCTCTTGAACTTAATTTCTCCAAGAACCTAGGACTGTGCTATGCTCCTACAAGTACCATATTCATAAATGTTCCTAGTATTTCCAAGTTGCAGTGGCACCCTTTTACAATCACCTCCTGCAGTGATACTGATTCTGATACCTTAAGCACTGTCATCAAAAGTTCAGGAACCTGGTCCAATACCTTGTACCAGAAGCTATCATCTTCATCTCCAGTGTCCCATCTTGATGTCTCCATTGAAGGGCCCTATGGACCAGCTTCAACCTTTTACTCAAGGCATGAATTGCTAGTGCTGGTGAGTGGAGGGAGTGGAATTACTCCTTTCATTTCCATAATCCGTTCACTAATCTTTAAGGCCAACACCGAAGGCGGCAAAACTCCTAAAGTTCTCCTTGTATGTGCCTTCAAGAAGTCCACTGATCTCACCATGATAGACCTCATCCTCCCGGTTTCAGCCACCAGCACCACCTTTGATATCTCATGCTTGCAGCTTCAGATTGAAGCCTATGTAACCAGAGAGGAACAGCCAGACATGAATGAGAAAAACCTTATTCAAACATTATGGTTCAAGTCAAATTCATTAGATGAACCAGTTTCTGCAGTTTTAGGAAAAAACAGTTGGCTCTATCTTAGCATTATCATCTCATCCTCCTTTATGTTATTCCTTCTACTTATTGCCATCTTAACTAGATATTACATATATCCAATTGACCATAACACGGACATGGTATACCCTTATTTCTCAAGGTCCAGTCTAAGCATGTTATTCATATGCATATCAATAGCCATTGTAGCAACATCTGCTTTCCTATGGAACAAGAAACAGAACAAGGATTTGGGGCAGATTAAAAACATTTACACATCAAATCCATCAACTTCTCCGGGTTCAGGATACTACAATGCTGACAGAGAATTAGGGAGTCTTCCCTTCCAATCCCTCGTTCAAACAGCTAAAGTACATTATGGAGAAAGACCGAACATAAAAAAAATACTCTCTGGCTGCAATGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGAAAAATGAGACATGAAGTAGCATCAATATGTACTTCTTGTTCAACAGATGACCTACATTTTGAGTCCCTTAGCTTCAGCTGGTGA 2148 0.4074 MDSETSTRGVSSSWVKYLQMGIWWFSVLIFVGYVMIWIVMPTNIFFPHWFRDIQAKADSIYFGQQGTTILIYTFPILLIATLASLYFYLEQKRSDHNTQSNVGFLRLAPWKRPLLVNGPLGIITMTELSFIIMFVLLLIWSLCFYIHQMFATVALDAANERVQVWEVKLEYSALAFGIVGYICLALLFFPVSRGSSILRFIGLTSEASIKYHIWLGHTAMTLLTAHGLGYILFWAQTHQILEIFKWSKIGVSNVAGAVALLAGLIMWATTLPSIRRKAFELFFYTHYLYIVFVVFFVFHVGFSNSCIVLPGFYLFMIDRYLRFLQSQQKIRLLSARVLPCEALELNFSKNLGLCYAPTSTIFINVPSISKLQWHPFTITSCSDTDSDTLSTVIKSSGTWSNTLYQKLSSSSPVSHLDVSIEGPYGPASTFYSRHELLVLVSGGSGITPFISIIRSLIFKANTEGGKTPKVLLVCAFKKSTDLTMIDLILPVSATSTTFDISCLQLQIEAYVTREEQPDMNEKNLIQTLWFKSNSLDEPVSAVLGKNSWLYLSIIISSSFMLFLLLIAILTRYYIYPIDHNTDMVYPYFSRSSLSMLFICISIAIVATSAFLWNKKQNKDLGQIKNIYTSNPSTSPGSGYYNADRELGSLPFQSLVQTAKVHYGERPNIKKILSGCNGSSIGVLVSGPRKMRHEVASICTSCSTDDLHFESLSFSW 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2295 715 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 18 714 - -
Aed1g2295 715 SFLD Ferric reductase subgroup (FRE) 12 715 - -
Aed1g2295 715 Pfam Ferric reductase NAD binding domain 434 698 IPR013121 GO:0016491
Aed1g2295 715 Pfam FAD-binding domain 329 428 IPR013112 GO:0016491
Aed1g2295 715 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 418 525 IPR039261 -
Aed1g2295 715 CDD NOX_Duox_like_FAD_NADP 332 513 - -
Aed1g2295 715 Pfam Ferric reductase like transmembrane component 176 297 IPR013130 -
Aed1g2295 715 Gene3D - 418 547 IPR039261 -
Aed1g2295 715 Gene3D - 600 713 IPR039261 -
Aed1g2295 715 PANTHER NADPH OXIDASE 18 714 - -
Aed1g2295 715 SFLD Ferric Reductase Domain 54 715 - -
Aed1g2295 715 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 325 430 IPR017927 GO:0016491
Aed1g2295 715 SUPERFAMILY Riboflavin synthase domain-like 330 426 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2295 Aed-Chr1 19083690 19087983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2295 27 715 Miscellaneous Gene Families AT1G01580 51.367 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2295 K00521 - gmx:100779692 1266.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2295 1 19083690 19087983 Aed1g2295 1 19083690 19087983 ECH