Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2281 ATGTCAATCCTGTGTGGTGTGCCTCTTCTTGAAAGTGTGTACTGTCTGGCTTGTGCTCGTTGGGCTTGGAAAAGATGTATTTACACTGCAGGCCATGACAGTGAAACTTGGGGACTTGCCACAGTAGAAGAATATGAGCCTGTTCCTCGCTTTTGTCGCTATATTTTAGCCGTGTATGAAGATGATATTCGACACCCTCTTTGGGAACCTCCTGGTGGCTATGGAATTAACCCTGATTGGTTAATACTCAAGAAGACATATGAAGATACACAAGGGAGGGCCCTGCCCTATATACTGTATCTTGATCATGATCATGATCATGCTGATATAGTTCTTGCCATTAGGGGGCTAAATTTGGCAAAGGAGAGTGACTATGCATTGCTGTTGGATAATAGATTGGGGAAGAGGAAGTTTGATGGAGGGTATGTTCACAATGGGCTGTTGAAGGCTGCTGGATGGGTTATGGATGCTGAATGTGAAGTTTTGAAGGAGTTGGTAGAGAAGTATCCAAACTATTCTCTGACTTTTACTGGACATTCCCTTGGATCAGGAGTAGCAGTAATGTTGAGCATGGTAGTGGTGCAGAATCGCGATAAGCTTGGAGATATTGAGAGGAAGAGGGTCAGGTGCTATGCTATTGCACCTGCTAGGTGTATGTCACTGAATTTGGCAGTCAGATATGCAGATGTCATAAACTCTGTGGTGCTTCAGGCAAGTTATCAAAATCTTTTTGACGACTTCTTACCAAGGACAGCCACTCCATTGGAAGATATATTCAAGTGTCTTTTCTGGTATGCCATAAGACCCTTTATAAGAGTAGCTCCGTTGTTATCCTGCTTGATGTACAAGGATAGAGTGTGTTCTATTATGCTAAATTCTATACATGTGTACCGGAGACTCTATGCTCCTGGCCGACTTTATCACATTGTTGAGAGAATGCCTTTCAGAATGGGAAGGTTCCCCCCAGTTGTGAGGACAGCAGTGCCAGTAGATGGAAGGTTTGAACACATAGTCCTTTCTTGTAATGCCACATCTGATCATGCCATTATTTGGATAGAGAAAGAAGCACAAAGGGCTTTAGATTTGATGAAGGAGAAAGATAATACATTGGAAATACCTGCAAATCAAATCATGGAGCGGCAAGAAAGATTAGCTAGACTCAATGAAGAATACAAAGAAGCATTACAAAGGGCTAAAACATTAGATGTTCTATATGCATATACACAAGCAACACAATATGGAACTTTTGATGAGGAGGGAGAGGACAGTTCAAGATGTTCACAAGGTGAATCTTCTTTTGGTTCAACTAATAGGAGTACAGTGGACGAAACTTGGGATGAAATGATTGAGTCTTTTTGA 1359 0.4187 MSILCGVPLLESVYCLACARWAWKRCIYTAGHDSETWGLATVEEYEPVPRFCRYILAVYEDDIRHPLWEPPGGYGINPDWLILKKTYEDTQGRALPYILYLDHDHDHADIVLAIRGLNLAKESDYALLLDNRLGKRKFDGGYVHNGLLKAAGWVMDAECEVLKELVEKYPNYSLTFTGHSLGSGVAVMLSMVVVQNRDKLGDIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQASYQNLFDDFLPRTATPLEDIFKCLFWYAIRPFIRVAPLLSCLMYKDRVCSIMLNSIHVYRRLYAPGRLYHIVERMPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMKEKDNTLEIPANQIMERQERLARLNEEYKEALQRAKTLDVLYAYTQATQYGTFDEEGEDSSRCSQGESSFGSTNRSTVDETWDEMIESF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2281 452 MobiDBLite consensus disorder prediction 426 442 - -
Aed1g2281 452 SUPERFAMILY alpha/beta-Hydrolases 41 235 IPR029058 -
Aed1g2281 452 Coils Coil 374 404 - -
Aed1g2281 452 MobiDBLite consensus disorder prediction 416 445 - -
Aed1g2281 452 Pfam Lipase (class 3) 111 251 IPR002921 GO:0006629
Aed1g2281 452 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Aed1g2281 452 Gene3D alpha/beta hydrolase 39 259 IPR029058 -
Aed1g2281 452 CDD Lipase_3 44 250 - -
Aed1g2281 452 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 451 - -
Aed1g2281 452 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2281 Aed-Chr1 18940630 18943417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2281 1 418 Miscellaneous Gene Families AT3G49050 71.667 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2281 - - gmx:100800742 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2281 1 18940630 18943417 Aed1g2281 1 18940630 18943417 ECH