Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2269 ATGATTACTCAGTACGGCATCAAATTCGCCGTCCACCTCATCACCAACCACTTCGGCAATCTCGTCGCTAAAGTGTGCGAAAACCTGTTTAGCCATGGACCCCTCACTCTGGATCAGTTGATTCGCTACACGGAGCTTACTAAGGACCAAGTCAGAAACTCGTTACTTGTCTTAGTCCAACACAATTGCGTCCAAGCATTTGTTTCTGCTCCTCAAGATGATGATGATGACGCAGACAGATTGAGAGTTAGAACTCAGTACCTGGTGTTGTTTGATAATCTAATCCACCGATTGAGATTTCCCAAATTCTTGGACATTGTGTCGCGGAAGCTTGATGAAGAATGTGTGGAACTGCTTGATGGATTGCTTCGGGATGGTAGGCTTACCCTGAAACAAATGGTTGACAGAGCTAGTCAAGGAAAAGGCAAGGGTTTTATGAACAAAAATGCTGTGGCTACAAAACTTGTAAGAGAGACACTCTGCAAACTTTTGACGTCTCGATTTGTTGAACGCTGCCCTGCCCCTGAGCCAATATTTGAAGCACCAGAGACATTAGAACAACGCGTTGTAGAAGCAGCAGTGCCTGGTGATGTAATAAGATTTTCACTCACTGCAGGTACAAGATCTACTGTTGACAGAGAAACAAATTCAGATGATGCTCAAATGATTAATGTTGAAGATGTCGCAAAAGAGGAGCAAATTCTTTGGCGTGCAAATTTTGAGGAGTTTATACGTCATCTTAGGCATAAGGTATTGAATGAGCATGTAAGAACTCAGCATGATGATGGAGCTGCTACTGTCTTAAGTGCAGTATTGGAGGCAACAGGAACTGGAGAGAAAAAAGTGAAAATGGAGAAGTCAGTTCCCTTGTCGCTGGATACAATTATCACAGAGGTGATGAAGACTGATACAGGACGAACAATGACCATAGATCGTATTAGAGCCTCCCTTGTCCAGTTGGGTTGTTCACAGGGGATGATTATAGAGGATTCATATAGTATTGATTTGAAGAAAATTATTGAACGGACTCGAAATGAAGAGGTTTTAATATATTTATGTTCTTTACAAATTACATTATATTATCTCTCCCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATACACACACACACATTTAG 1149 0.4091 MITQYGIKFAVHLITNHFGNLVAKVCENLFSHGPLTLDQLIRYTELTKDQVRNSLLVLVQHNCVQAFVSAPQDDDDDADRLRVRTQYLVLFDNLIHRLRFPKFLDIVSRKLDEECVELLDGLLRDGRLTLKQMVDRASQGKGKGFMNKNAVATKLVRETLCKLLTSRFVERCPAPEPIFEAPETLEQRVVEAAVPGDVIRFSLTAGTRSTVDRETNSDDAQMINVEDVAKEEQILWRANFEEFIRHLRHKVLNEHVRTQHDDGAATVLSAVLEATGTGEKKVKMEKSVPLSLDTIITEVMKTDTGRTMTIDRIRASLVQLGCSQGMIIEDSYSIDLKKIIERTRNEEVLIYLCSLQITLYYLSLSLSLSIYIYIYIYTHTHI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2269 382 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 10 68 IPR013197 -
Aed1g2269 382 Gene3D - 239 334 IPR036388 -
Aed1g2269 382 Gene3D - 2 74 IPR036388 -
Aed1g2269 382 Pfam RNA polymerase III subunit RPC82 159 313 IPR008806 GO:0003677|GO:0006351
Aed1g2269 382 Gene3D - 91 181 IPR036388 -
Aed1g2269 382 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 3 348 IPR039748 GO:0003697|GO:0005666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2269 K03023 - gmx:100784750 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2269 1 18824342 18830795 Aed1g2269 1 18824342 18830795 ECH