Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2266 ATGCGTGAGATTCTTCACATCCAGGGAGGGCAATGCGGGAACCAGATCGGAGCAAAGTTCTGGGAGGTGGTGTGCGCTGAGCACGGGATCGACTCTACGGGAAGGTACCAGGGTGATAACGAGTTGCAACTCGAGCGAGTCAACGTTTACTACAATGAAGCCAGATTTCAGGTTTGCCACTCTCTCGGTGGTGGAACTGGTTCTGGAATGGGAACACTGTTGATCTCAAAGATCAGGGAAGAATACCCTGACCGAATGATGCTCACATTCTCTGTGTTCCCATCCCCTAAGGTTTCTGACACTGTTGTTGAACCTTACAATGCAACCCTATCAGTTCACCAGCTCGTTGAGAATGCAGATGAGTGCATGGTTTTGGATAACGAAGCTCTTTATGACATCTGTTTCCGTACCCTTAAGCTCACCACTCCAAGCTTTCAGGCTTCAGAGGCCCACCAAGATATGCTTGTAAGTGCTTAA 477 0.4885 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDNELQLERVNVYYNEARFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFQASEAHQDMLVSA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2266 158 Pfam Tubulin/FtsZ family, GTPase domain 55 134 IPR003008 GO:0005525
Aed1g2266 158 Pfam Tubulin/FtsZ family, GTPase domain 3 54 IPR003008 GO:0005525
Aed1g2266 158 PANTHER TUBULIN 1 54 IPR000217 GO:0005874|GO:0007017
Aed1g2266 158 PANTHER TUBULIN BETA-2 CHAIN 1 54 - -
Aed1g2266 158 PANTHER TUBULIN BETA-2 CHAIN 56 147 - -
Aed1g2266 158 Gene3D Tubulin/FtsZ, GTPase domain 55 158 IPR036525 -
Aed1g2266 158 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 146 IPR036525 -
Aed1g2266 158 SMART Tubulin_4 3 158 IPR003008 GO:0005525
Aed1g2266 158 PANTHER TUBULIN 56 147 IPR000217 GO:0005874|GO:0007017
Aed1g2266 158 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 63 69 IPR017975 GO:0005525|GO:0005874|GO:0007017
Aed1g2266 158 ProSitePatterns Tubulin-beta mRNA autoregulation signal. 1 4 IPR013838 -
Aed1g2266 158 Gene3D Tubulin/FtsZ, GTPase domain 1 54 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2266 Aed-Chr1 18804410 18808525 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2266 K07375 - oeu:111406684 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2266 1 18804410 18808525 Aed1g2266 1 18804410 18808525 ECH