Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2253 ATGACAGAGGAGGAATCCAAAAAGGTGTCTGAGACTGAGAGTATTCCCTCTAATATTCCTGAACCTGAACCTGAACCTGCTGCTCCAAAGGAGGATGTGGCTGAGGAGAAATCTGTAATTCCACAACCCTCTCCTTCTCCTCCAGATGAATCCAAAGCTCTTGTCAAAGTTGAGAAGACTAGTGAAGTTGCTGAAGAGAAACCAAGCGAGGGATCTGTGAACCGAGATGCTGTCCTTGCAAGAGTTGCAACTGAAAAGAGGCTTTCACTTATCAAAGCATGGGAAGAAAGTGAAAAGTCAAAAGCAGAAAACAAGTCTCACAGAAAGCTTTCAGCAGTTTCAGCATGGGAGAACAGTAAGAAAGCTGCAGCGGAGGCAAAGTTGAGAAAGATTGAACAACAACTGGAGAAGCAAAAAGCAGAATATGGAGAGAAATTGAAAAACAAAATAGCTACAATCCACCGAGAAGCTGAAGAAAAGAGGGCATTTATTGAGGCCAAAAAAGGTGAAGATTTCTTGAAGGCAGATGAGACAGCTGCAAAGTACAGGGCAACTGGAACTGCTCCAGAGAAACTCTTTGGTTGTTTCTAA 591 0.4315 MTEEESKKVSETESIPSNIPEPEPEPAAPKEDVAEEKSVIPQPSPSPPDESKALVKVEKTSEVAEEKPSEGSVNRDAVLARVATEKRLSLIKAWEESEKSKAENKSHRKLSAVSAWENSKKAAAEAKLRKIEQQLEKQKAEYGEKLKNKIATIHREAEEKRAFIEAKKGEDFLKADETAAKYRATGTAPEKLFGCF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2253 196 Pfam Remorin, C-terminal region 86 191 IPR005516 -
Aed1g2253 196 PANTHER REMORIN 1.4 1 196 - -
Aed1g2253 196 PANTHER OS02G0117200 PROTEIN 1 196 - -
Aed1g2253 196 MobiDBLite consensus disorder prediction 52 72 - -
Aed1g2253 196 Coils Coil 121 152 - -
Aed1g2253 196 Pfam Remorin, N-terminal region 31 82 IPR005518 -
Aed1g2253 196 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2253 Aed-Chr1 18727039 18729688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2253 - - gmx:100305501 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2253 1 18727039 18729688 Aed11g1703 11 20693364 20694965 ECH
Aed11g1703 11 20693364 20694965 Aed1g2253 1 18727039 18729688 ECH
Aed1g2253 1 18727039 18729688 Aed1g2253 1 18727039 18729688 ECH
Aed1g2253 1 18727039 18729688 Aed7g0575 7 4218664 4221589 PCT