Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2251 ATGGTTAAGGTGACTATAGTTGGAAGGGTAAACGATGGATTGCCTCTAGCACAAGGACTGAGATACATGAATGAAGAGAATGGACATCTTTCATGTTACATGCAACAATCAGAGTTCGTACTCAAAGAAATTTCAAGGGGAGCATTAACAGCTTCCAAGATGACTATTCATATTGATCATTTCTGCTTCAACTACTTGGTCGAGAATGGAGTTGTTTTCATTGTGTTGTGCGAGTCCACGTACCCAAGAAAACTGGCCTTCCATTACCTACAAGATATACAAAAGGAGTTTGAGAAATTTGATAAAACCCTCATAGGCAAAATAACAAGGCCATACAGCTTTGTCAAATTTGATGGTATAATTGCAAACATTAGCAGACAATACATAGATACAAGAACTCAGGCCAACCTATCAAAACTTAATGCTAACCGGCAACAAGATTTAGATATTGCCACTGAAGACATTTGCAACATTATAGGAAGGAAGAGAAAATTTGAAACAATGAGAAGGTTACAGGTTACTCCTCAACCTGAATCCACAATATGGTGTTCCCCACGCCTTGAGGTGATTGCGTTGAAATGGACACCTATTATGATAATTGTAATTACTTCGATGGCTCTTCTATGGGCTAGCTTAGCCCTCACAGATGACTTCATTATTTCAAGCTTGTGA 672 0.3854 MVKVTIVGRVNDGLPLAQGLRYMNEENGHLSCYMQQSEFVLKEISRGALTASKMTIHIDHFCFNYLVENGVVFIVLCESTYPRKLAFHYLQDIQKEFEKFDKTLIGKITRPYSFVKFDGIIANISRQYIDTRTQANLSKLNANRQQDLDIATEDICNIIGRKRKFETMRRLQVTPQPESTIWCSPRLEVIALKWTPIMIIVITSMALLWASLALTDDFIISSL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2251 223 Pfam Regulated-SNARE-like domain 39 118 IPR010908 -
Aed1g2251 223 ProSiteProfiles Longin domain profile. 6 121 IPR010908 -
Aed1g2251 223 SMART Longin_2 36 120 IPR010908 -
Aed1g2251 223 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 221 IPR044565 GO:0005484|GO:0006888|GO:0006890
Aed1g2251 223 CDD Longin 5 128 IPR010908 -
Aed1g2251 223 PANTHER SNARE-LIKE SUPERFAMILY PROTEIN 1 221 - -
Aed1g2251 223 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Aed1g2251 223 Gene3D Longin domain 1 129 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2251 K08517 - gmx:100781527 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2251 1 18721734 18723317 Aed1g2251 1 18721734 18723317 ECH