Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2234 ATGGCCAGAAGAGATATTGAAAGTGGCGGTGGAGGAACCAAGAACATCACAAGAACGGAGGAAAACTCTTACTCTGCGCCTGAATCTTCCCACGTTTATGAAGCTGAGACCCATTGGACATCATGGCTCGTGCCCATGTTTGTGGTTGCTAATATTGCTGTTTTTGTTATTACGATGTACATCAACAATTGTCCCAAGAACAACCTCAGTTTCCAAGGTCGCTGCGTGGCAAGGTTCCTTGGAAGGTTCTCTTTTCAGCCTATGCAGGAGAATCCCTTGCTTGGTCCTTCTTCTTCAACATTGACCAAGATGGGAGCCCTTCGATGGGGTAATGTTGTGAATAGACATCAGGGATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGAATTATTCATTTGCTAGCTAATATGTTGAGCCTGGTCTTCATTGGCATTCGCCTTGAGCAGCAATTCGGGTTTATTAAGATTGGAATCATATACTTGTTGTCCGGGTTTGGTGGAAGTGTACTGTCGTCTCTATTTATCAGAGACCAAATCTCTGTTGGTGCTTCTGGTGCCCTTTTTGGACTTCTTGGGGCAATGCTGTCTGAACTTATCACAAACTGGACTATATATTCCAATAAAGCAATGGCTTTAATAACCCTTCTAGTGATAATTGTGATCAACCTTGGCATTGGCATTTTGCCACATGTGGATAATTTTGCTCACATAGGAGGATTCCTGGTGGGACTTCTCCTTGGTTTTATCTTGCTGCCACGCCCTCAGTTCGGGTGGCTAGAGCAGCGACGTCTTCCTGCCGGTGTTCGGATGAAGTCTAAGTACAAGGGTTACCAATATGTTCTAGGGATTGTGTCTCTTGTTCTGTTGATTGCAGGGTTATCGACTGCATTGGTGATGCTATTCCGTGGTGAGAAAGGGTATGATCACTGCCATTGGTGTCGCTACCTAACTTGTGTCCCATCCTCTAAATGGGAATGCAACAATGACAGTTAA 996 0.4478 MARRDIESGGGGTKNITRTEENSYSAPESSHVYEAETHWTSWLVPMFVVANIAVFVITMYINNCPKNNLSFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWGNVVNRHQGWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLLSGFGGSVLSSLFIRDQISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFAHIGGFLVGLLLGFILLPRPQFGWLEQRRLPAGVRMKSKYKGYQYVLGIVSLVLLIAGLSTALVMLFRGEKGYDHCHWCRYLTCVPSSKWECNNDS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2234 331 SUPERFAMILY Rhomboid-like 39 256 IPR035952 -
Aed1g2234 331 Pfam Rhomboid family 113 255 IPR022764 GO:0004252|GO:0016021
Aed1g2234 331 PANTHER RHOMBOID-LIKE PROTEIN 3 1 329 - -
Aed1g2234 331 PANTHER RHOMBOID-RELATED 1 329 IPR002610 GO:0004252|GO:0006508|GO:0016021
Aed1g2234 331 Gene3D - 37 254 IPR035952 -
Aed1g2234 331 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2234 Aed-Chr1 18606085 18609028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2234 - - gmx:100809265 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2234 1 18606085 18609028 Aed7g0541 7 3985238 3985516 ECH
Aed1g2234 1 18606085 18609028 Aed1g2234 1 18606085 18609028 ECH