Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2229 ATGGCGAATGGGGATTCTTCTTCTTCTTCTTCCCGCAGATACCACAGCGTTATGAACTTCAGAAAAGCACACATATACATTCTCCTTCTCTGCATAGCCTCCTACCTCCTCGCCGCGTTCCACCGAGGATCGCGCCTCACCACCACGAACCTCTCCGTGCGGTGCAACAACCACTTCAGCGCCGAATCTTCCAGAACATTCCAGCGGTGCAGCGCCAACTTCAGCGAGTACACGCCGTGCCAGGACCCGCAAAGGTCGCTGAGGTACACGCGGAGCAGGATGATATACAGAGAGAGGCACTGTCCCGAGAAGCCCTTAAAGTGTAGGGTACCCGCCCCCCACGGGTACCGCAACCCCTTCCCCTGGCCGACCAGTAGAGACCGCGCGTGGTTCGCTAATGTCCCACACCGTGAGCTCACCGTGGAGAAGGCCGTGCAGAACTGGATCCGCACCAACGGCGATCTCTTCGTCTTCCCCGGCGGCGGAACCACCTTCCCCAACGGCGCCGACGCCTACATTGAGGATATCGGAAAGTTGATTAATCTCAAAGATGGCTCTATTCGGACTGCTCTCGATACTGGCTGTGGGGTTGCTAGTTGGGGAGCCTATCTTCTATCACGCAATATCCTAACATTGTCAATTGCACCAAGGGATACCCATGAAGCACAAGTTCAATTTGCTCTTGAGCGAGGTGTTCCTGCATTGATTGGAATCCTAGCCTCTAAGAGGCTTCCTTTCCCTTCCAGAGCTTTTGACATCTCCCATTGCTCTCGCTGCCTCATTCCATGGGCTGAACATGATGGGATTTTTCTTAACGAAGTGGATCGAGTTCTACGCCCTGGTGGGTATTGGATCCTATCTGGACCACCAATCAACTGGAACAAATACTGGAAAGGGTGGCAAAGAAAAAAGGAGGACTTGAACCAAGAGCAGATCCAAATTGAAAAGGTAGCCAAAAGTCTTTGCTGGAACAAGCTAGTGGAGAAGGATGATATTGCAATCTGGCAGAAACCAATAAACCATTTAGATTGCAAGGCCACCCAACACCGGTCTCTGTGCAATGCACAAACTGATCCTGACAAGGCCTGGTATACTAATATGCAAACATGTCTGAGTCCTGTTCCTGATGTGTCTAGCAAAGAAGAAACTGCAGGTGGGGTAGTGGACAATTGGCCAAAGAGATTAAAATCCATCCCACCAAGGATTTATAAGGGTACCATAGAAGGGGTTACTGCCGAAACTTATTCAAAAAATCATGAGCTGTGGAAGAAAAGGGTATCATATTATAAGACAGTGAACAATCTAGTAGGAACTAGGAGATACCGAAATCTCCTGGACATGAATGCATACTTGGGTGGATTTGCGGCTGCACTAATTGAGGACCCTGTTTGGGTCATAAACGTGGTCCCTGCTCAGGCTAAGGTTAACACACTTGGAGCCATATATGAACGTGGCTTGATTGGAATATATCATGACTGGTGTGAGGCGATGTCTACTTATCCTAGAACTTATGATCTAATTCATGCTGACTCAGTGTTCAGCCTTTACAGTAACAGATGTGAATTGGAAGACATTCTGCTAGAAATGGATAGGATTCTTAGACCTGAAGGATGTGTAATCATCCGAGATGATGCTGATATATTGGTAAAAGTAAAGAGCATCGTCAATGGATTGGAATGGGACAGTATAATTGTAGACCATGAAGATGGACCTCTTCAAAGGGAGAAACTTCTATTTGCTGTGAAGAAGTATTGGACAGCTCCACCAGCTTCCGACAAGACTAATTAA 1788 0.4799 MANGDSSSSSSRRYHSVMNFRKAHIYILLLCIASYLLAAFHRGSRLTTTNLSVRCNNHFSAESSRTFQRCSANFSEYTPCQDPQRSLRYTRSRMIYRERHCPEKPLKCRVPAPHGYRNPFPWPTSRDRAWFANVPHRELTVEKAVQNWIRTNGDLFVFPGGGTTFPNGADAYIEDIGKLINLKDGSIRTALDTGCGVASWGAYLLSRNILTLSIAPRDTHEAQVQFALERGVPALIGILASKRLPFPSRAFDISHCSRCLIPWAEHDGIFLNEVDRVLRPGGYWILSGPPINWNKYWKGWQRKKEDLNQEQIQIEKVAKSLCWNKLVEKDDIAIWQKPINHLDCKATQHRSLCNAQTDPDKAWYTNMQTCLSPVPDVSSKEETAGGVVDNWPKRLKSIPPRIYKGTIEGVTAETYSKNHELWKKRVSYYKTVNNLVGTRRYRNLLDMNAYLGGFAAALIEDPVWVINVVPAQAKVNTLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSVFSLYSNRCELEDILLEMDRILRPEGCVIIRDDADILVKVKSIVNGLEWDSIIVDHEDGPLQREKLLFAVKKYWTAPPASDKTN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2229 595 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 425 544 IPR029063 -
Aed1g2229 595 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 76 582 IPR004159 GO:0008168
Aed1g2229 595 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 23 589 IPR004159 GO:0008168
Aed1g2229 595 PANTHER METHYLTRANSFERASE PMT20-RELATED 23 589 - -
Aed1g2229 595 Gene3D Vaccinia Virus protein VP39 168 355 IPR029063 -
Aed1g2229 595 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 98 302 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2229 Aed-Chr1 18588644 18591790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2229 - - gmx:100778314 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2229 1 18588644 18591790 Aed7g0537 7 3964255 3970364 ECH
Aed1g2229 1 18588644 18591790 Aed1g2229 1 18588644 18591790 ECH