Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2227 ATGGGGGCTGGTGTTTCTTCTTCACCTAATAATAAAGCTGAAAAGGAATTAGGAGGAGGGTCTATTTGTTCTTCTTCTTCAAGACCCGGTCTTGGTGATATCCCAGAGAGTTGCATCTCCTCCTTGTTCATGAATCTTGATCCACCCGATATATGCAAATTGGCAAGAGTGAATAGAACCTTTCACCGAGCTTCCTCAGCTGATTTTGTATGGGAATCAAAGTTACCACCCAGTTACAAGTTTCTTGCTAATAAAGTTCTTGGTGAAGATAATATCGCTACTATGACTAAGAAAGAGATTTATGCTAAACTTTGCCTACCCAATCGCTTTGATGCTGCTACCAAAGAAGTTTGGTTGGACAAATGTAGCGGGCAAGTTTGTTTGTTCATGTCATCCAAGTCCTTGAAGATTACAGGAATAGATGATAGAAGATACTGGAATTATATTCCAACTGAAGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGGTGGGGGAGCTAGAGTTTGAATTCCCTGTGGGGAGTTACAGCTTAGTTTTCAGACTCCAATTGGGCAAGGCCTCAAAGAGATTGGGCCGGCGCGTGTGCAACACTGATCAAGTGCATGGCTGGGACATCAAGCCCGTCCGATTCCAACTTTCTACATCAGACGGCCAGCGTTCACTCTCAGAGTGTTACTTACGTGGGCCTGGAGACTGGATTTACTACCATGTTGGAGATTTCGTCGTCGAAAAGCCCAATGACCCAATAAATATCAAGTTTTCGTTGGCCCAAATAGATTGCACTCACACCAAAGGTGGCCTCTGCGTAGATAGTGCCATCATTTGCCCAACAGAGTTTAAAGAAAGACTCAAACAAAGTTAA 885 0.4339 MGAGVSSSPNNKAEKELGGGSICSSSSRPGLGDIPESCISSLFMNLDPPDICKLARVNRTFHRASSADFVWESKLPPSYKFLANKVLGEDNIATMTKKEIYAKLCLPNRFDAATKEVWLDKCSGQVCLFMSSKSLKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFEFPVGSYSLVFRLQLGKASKRLGRRVCNTDQVHGWDIKPVRFQLSTSDGQRSLSECYLRGPGDWIYYHVGDFVVEKPNDPINIKFSLAQIDCTHTKGGLCVDSAIICPTEFKERLKQS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2227 294 Pfam Phloem protein 2 126 284 IPR025886 -
Aed1g2227 294 PANTHER F-BOX PROTEIN 1 293 - -
Aed1g2227 294 SUPERFAMILY F-box domain 20 86 IPR036047 GO:0005515
Aed1g2227 294 MobiDBLite consensus disorder prediction 1 29 - -
Aed1g2227 294 ProSiteProfiles F-box domain profile. 28 74 IPR001810 GO:0005515
Aed1g2227 294 PANTHER F-BOX PROTEIN PP2-A15 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2227 Aed-Chr1 18571452 18574499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2227 - - gmx:100795463 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2227 1 18571452 18574499 Aed7g0535 7 3931294 3934714 ECH
Aed1g2227 1 18571452 18574499 Aed1g2227 1 18571452 18574499 ECH
Aed7g0535 7 3931294 3934714 Aed1g2227 1 18571452 18574499 PCT