Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2209 ATGGCCCAGTTTACCTCCTCAGGTAAATCCACCGATCTCACAAAAGAAGACCGTAACGGAAAAAGTGCACTTGTTGTTTGCTTTGGTGAAATTTTAATAGATTTTGTGCCAACAGTGGGAGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTGGCTGTTGGCATCTCTAGGCTTGGTGGTTCATCTGCTTTTATAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGCAGAACAATGTTGAGACATCTGGCATAAAGTATGACCCCAATGCAAGAACCGCATTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGTGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGACATGCTTCTTCAAGAGTCAGAGCTTGATGAAAATCTCATAAAGAAGGCTAAAATTTTCCATTATGGTTCGATCAGCTTGATTGATGAGCCTTGCAAGTCTGCTCATCTTGCTGCTATGAGAATTGCTAAAGAATCTGGCTGCATTCTTTCATATGATCCAAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCAAGGGATGGCATCAATAGTATATGGGACCAAGCCAATGTCATAAAGGTAAGTGAGGATGAGATTAGATTTTTGACTGGTGGTGATGATCCGTATGATGATAATGTTGTATTAAAGAAGCTTTTTCACCCTAATCTCAAGCTTTTAATAGTTACTGAAGGGTCAGAAGGTTGTAGATATTACACCAAGGAATTTAAGGGCAGGGTTGCTGGTGTAAAAGTTAAAGCCGTTGACACAACTGGTGCTGGTGATGCATTTGCTAGTGGGATTATCTATAGCTTAGCTTCTGACCGAAGTCTTCTCCAGAATGAGGAGCGTCTCCGAAAGGCTCTACATTTTGCCAATGTATGTGGTGCCATCACTGTAACAGAGAGAGGGGCAATTCCTGCACTACCTACAAAAGAAGCTGTTCTTCAATTCGCTGAAACATAA 1026 0.423 MAQFTSSGKSTDLTKEDRNGKSALVVCFGEILIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKQNNVETSGIKYDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELDENLIKKAKIFHYGSISLIDEPCKSAHLAAMRIAKESGCILSYDPNLRLALWPSAEAARDGINSIWDQANVIKVSEDEIRFLTGGDDPYDDNVVLKKLFHPNLKLLIVTEGSEGCRYYTKEFKGRVAGVKVKAVDTTGAGDAFASGIIYSLASDRSLLQNEERLRKALHFANVCGAITVTERGAIPALPTKEAVLQFAET 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2209 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Aed1g2209 341 CDD bac_FRK 24 326 - -
Aed1g2209 341 PANTHER HEXOKINASE FAMILY MEMBER 16 339 - -
Aed1g2209 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Aed1g2209 341 PANTHER FRUCTOKINASE-7-RELATED 16 339 - -
Aed1g2209 341 Gene3D - 21 341 IPR029056 -
Aed1g2209 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Aed1g2209 341 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Aed1g2209 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Aed1g2209 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Aed1g2209 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2209 Aed-Chr1 18428308 18431452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2209 K00847 - gmx:100818404 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2209 1 18428308 18431452 Aed7g0508 7 3689854 3697146 ECH
Aed1g2209 1 18428308 18431452 Aed1g2209 1 18428308 18431452 ECH
Aed7g0508 7 3689854 3697146 Aed1g2209 1 18428308 18431452 PCT