Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2207 ATGGCTTTCTCTTGTAATCTCGACAGCTTCATCCTCTCTGCCTACAAACCCCAAAACTCCATTCTCCCAATTTCAATCCAAACTTCCTCCTTCCTCCAATGTTCTTCTTCCTTGAAGCCTCAGAAGCTTCCCTTCAGAATCCGCCATGGTTCAACCATCAGAGCCACGTCATCATCCTCATCCCCTTCCACAACCATTGCCGAACCTGAAGGCATTAAGATTAAATCGATTCCAACCAAGCCCATTGAGGGACAAAAGACTGGGACCAGTGGGCTTCGAAAGAAGGTGAAGGTGTTTAAGCAAGAAAATTACCTTGCAAATTGGATCCAGGCCCTGTTTAATTCATTGCCTCCGGAGGATTACAAGAATGGTTTGTTGGTGTTGGGAGGTGATGGTCGATACTTTAATCGGGAAGCTGCACAGATAATAATCAAAATTGCTGCTGGAAATGGTGTTGGAAAAATTATGGTTGGAAAGGAAGGTGTTTTGTCAACACCAGCTGTTTCTGCTGCAAATGGTGGATTTATTATGAGTGCAAGCCATAATCCTGGTGGACCTGAATATGATTGGGGTATTAAGTTCAATTACAGCAGTGGACAACCTGCACCGGAATCCATCACTGACAAGATTTATGGAAACACCCTGTCGATCTCTGAGATAAAGATAGCTGACATTCCTGATGTTGACTTATCAAAAGTTGGGGTTACAAAGTTTGGAAGCTTCAGTGTGGAAGTAATAGACCCAGTCTCTGACTATCTGGAGCTATTGGAGACAGTATTTGATTTTCAGCTAATCAGAGGTCTTCTTTCACATCCAGATTATAGGTTTATATTTGACGCGATGCATGCAGTTACTGGTGCTTATGCTAAACCTATCTTTGTTGATAAACTTGGTGCTAGTCTGGATTCAATTCTTAATGGAATCCCTTTGGAAGATTTTGGACATGGCCATCCTGATCCTAATCTAACATATGCAAAGGATCTTGTCAACATTCTGTATGCTGAAAATGGACCTGATTTTGGAGCTGCCAGTGATGGGGATGGTGATAGAAATATGATTTTAGGAAGAAGTTTCTTTGTAACTCCTTCAGACTCTGTAGCAGTTATTGCAGCCAATGCAAGGGAAGCAATTCCGTACTTCAAGAACGGTGTTAAGGGTCTTGCTCGTTCAATGCCAACAAGTGGTGCTCTGGACTGTGTTGCTGAAAAATTGAACCTCCCTTTCTTTGAGGCATATGGACCCTGGATTCAGGTCCCCACTGGATGGAAATTTTTTGGGAATCTTATGGATGCTGGGAATTTGTCAGTTTGCGGGGAAGAGAGTTTTGGAACAGGCTCTGACCACATTCGTGAGAAAGACGGCATCTGGGCTGTCTTAGCTTGGCTTTCTATTATTGCACATCGCAACAAAGACAAGAAGCCAGGGGAGAAATTGATATCCGTATCTGACGTTGTGACAGAGCACTGGGCAACTTATGGAAGGAATTTCTTCTCTAGATATGACTACGAGGAATGTGAATCGGAAGGTGCCAACAAAATGATAGAATACCTACGAGATATTTTGTCTAAGAGCAAGCATGGTGATAAGTATGGAAGTTATGTCCTCCAGTTTGCAGATGATTTTACATACACTGATCCTGTAGATGGAAGTGTGGTATCAAAACAAGGTGTTCGGTTTGTTTTTACAGATGGTTCGAGGATTATATATCGTTTATCAGGAACTGGTTCTGCAGGGGCAACTGTTAGAGTGTACATTGAACAGTTTGAACCAGATGTCTCTAAACATGATGTTGATGCTCAAATTGCCTTAAAACCATTAATAGATTTGGCACTATCTGTGTCAAAGCTCAAAGAATTCACAGGGAGGGAGAAGCCTACAGTCATCACATAA 1890 0.4228 MAFSCNLDSFILSAYKPQNSILPISIQTSSFLQCSSSLKPQKLPFRIRHGSTIRATSSSSSPSTTIAEPEGIKIKSIPTKPIEGQKTGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNREAAQIIIKIAAGNGVGKIMVGKEGVLSTPAVSAANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSKVGVTKFGSFSVEVIDPVSDYLELLETVFDFQLIRGLLSHPDYRFIFDAMHAVTGAYAKPIFVDKLGASLDSILNGIPLEDFGHGHPDPNLTYAKDLVNILYAENGPDFGAASDGDGDRNMILGRSFFVTPSDSVAVIAANAREAIPYFKNGVKGLARSMPTSGALDCVAEKLNLPFFEAYGPWIQVPTGWKFFGNLMDAGNLSVCGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDKKPGEKLISVSDVVTEHWATYGRNFFSRYDYEECESEGANKMIEYLRDILSKSKHGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDVDAQIALKPLIDLALSVSKLKEFTGREKPTVIT 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2207 629 SUPERFAMILY Phosphoglucomutase, C-terminal domain 494 629 IPR036900 GO:0016868|GO:0071704
Aed1g2207 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 362 492 IPR005846 GO:0005975|GO:0016868
Aed1g2207 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 346 499 IPR016055 GO:0005975|GO:0016868
Aed1g2207 629 Gene3D - 359 464 - -
Aed1g2207 629 PANTHER PHOSPHOGLUCOMUTASE, CHLOROPLASTIC 52 629 - -
Aed1g2207 629 CDD PGM1 75 629 - -
Aed1g2207 629 Gene3D - 475 629 - -
Aed1g2207 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 273 292 IPR005841 GO:0005975|GO:0016868
Aed1g2207 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 338 353 IPR005841 GO:0005975|GO:0016868
Aed1g2207 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 173 187 IPR005841 GO:0005975|GO:0016868
Aed1g2207 629 PRINTS Phosphoglucomutase/phosphomannomutase family signature 309 322 IPR005841 GO:0005975|GO:0016868
Aed1g2207 629 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 552 604 IPR005843 GO:0016868|GO:0071704
Aed1g2207 629 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 52 629 IPR045244 GO:0004614|GO:0005975
Aed1g2207 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 251 354 IPR005845 GO:0005975
Aed1g2207 629 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 174 183 IPR016066 GO:0000287
Aed1g2207 629 Gene3D - 256 358 - -
Aed1g2207 629 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 85 218 IPR005844 GO:0005975|GO:0016868
Aed1g2207 629 Gene3D - 73 255 - -
Aed1g2207 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 250 359 IPR016055 GO:0005975|GO:0016868
Aed1g2207 629 SUPERFAMILY Phosphoglucomutase, first 3 domains 73 280 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2207 Aed-Chr1 18408421 18418831 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2207 K01835 - gmx:100802730 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2207 1 18408421 18418831 Aed1g2207 1 18408421 18418831 ECH