Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed1g2194 | ATGATGAAACAGGTTCTTCTTCCTGTTCTGCTCTTCTTGGCCTATGGATTGGCCCTCTCAGTCTCAGAGTCTGAATCTGTTTCTCTTTTGCCTCACGCCGCTGAGTCCTTCAATGTCAGCTATATCCAGATGAAGAACGCGGCGAGTTGTTCTTATTTGGTGGTTATATCTACTAGTTGTTCGTCTCCTAGGTATACAAGGGACCAGATCAGTATTTCTTTTGGGGATGCTTATGGAAACCAGATAACTGGTCCGTGTGCATATCAGATATGTTATGTGTACCTATATAGATCTGGATCAGATGGCTGGAAGCCTGAAAGTGTGAAAATAAATAGTTATAATGGCAGACCTGTTACTTTCTATTACAACACATATATCCCCAGAGATACCTGGTATGGGTTTAATTTGTGCAACGGCGCTGCTTCTTCTTCAAAAAAGTATAAAACTGTTGTTTTTTTTACACCTTTAGTATAA | 474 | 0.403 | MMKQVLLPVLLFLAYGLALSVSESESVSLLPHAAESFNVSYIQMKNAASCSYLVVISTSCSSPRYTRDQISISFGDAYGNQITGPCAYQICYVYLYRSGSDGWKPESVKINSYNGRPVTFYYNTYIPRDTWYGFNLCNGAASSSKKYKTVVFFTPLV | 157 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed1g2194 | 157 | PANTHER | EMBRYO-SPECIFIC PROTEIN ATS3B | 9 | 82 | - | - | |
| Aed1g2194 | 157 | Pfam | Embryo-specific protein 3, (ATS3) | 81 | 137 | IPR010417 | - | |
| Aed1g2194 | 157 | PANTHER | - | 81 | 149 | - | - | |
| Aed1g2194 | 157 | PANTHER | - | 9 | 82 | - | - | |
| Aed1g2194 | 157 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 49 | 134 | IPR036392 | GO:0005515 | |
| Aed1g2194 | 157 | PANTHER | EMBRYO-SPECIFIC PROTEIN ATS3B | 81 | 149 | - | - | |
| Aed1g2194 | 157 | CDD | PLAT | 50 | 138 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed1g2194 | Aed-Chr1 | 18326377 | 18328814 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed1g2194 | - | - | gmx:100305495 | 254.603 |
Event-related genes