Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2038 ATGAGAGAGTGCATCTCAATCCACATTGGTCAGGCCGGTATCCAGGTCGGAAATGCATGCTGGGAGCTCTACTGCCTCGAGCACGGCATCGGGCCTGATGGGCAAATGCCAAGTGACAAGACAGTTGGCGGTGGTGATGATGCTTTCAACACTTTCTTCAGCGAGACCGGCGCTGGAAAGCACGTGCCACGTGCCGTCTTTGTAGATCTCGAGCCAACGGTTATTGATGAGGTGAGGACCGGAACTTACCGCCAGCTTTTCCACCCAGAGCAGCTCATCAGTGGCAAAGAAGATGCCGCCAACAACTTTGCCCGTGGTCATTATACCATTGGGAAAGAGATCGTTGATCTGTGCTTGGACCGCATCAGAAAGCTTGCTGACAACTGCACTGGTCTCCAAGGGTTCTTGGTCTTCAATGCCGTTGGTGGAGGAACTGGTTCTGGACTTGGTTCCCTTCTTGCTTTTGAGCCATCGTCCATGATGGCCAAGTGTGATCCTCGCCACGGAAAATACATGGCATGTTGCCTGATGTACCGTGGTGACGTGGTGCCCAAGGATGTGAATGCTGCTGTTGGCACCATCAAGACCAAGAGGACCATTCAGTTTGTGGATTGGTGCCCTACGGGTTTCAAGTGCGGTATTAACTACCAGCCACCTACCGTTGTTCCTGGTGGTGATCTTGCAAAGGTGCAGAGAGCCGTTTGCATGATATCAAACTCCACCAGTGTGGCTGAGGTGTTTGGTCGCATTGACCACAAGTTTGATCTCATGTATGCTAAGCGTGCGTTTGTCCATTGGTACGTGGGTGAGGGCATGGAAGAAGGTGAATTTTCTGAAGCCCGTGAGGATCTTGCAGCCCTTGAGAAAGATTATGAAGAAGTGGGTGCTGAGTCTGGCGAGGGCCACGAAGAGGACGAAGACTACTAG 927 0.521 MRECISIHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGHEEDEDY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2038 308 Gene3D Tubulin/FtsZ, GTPase domain 1 153 IPR036525 -
Aed1g2038 308 Pfam Tubulin C-terminal domain 154 251 IPR018316 -
Aed1g2038 308 Pfam Tubulin/FtsZ family, GTPase domain 3 154 IPR003008 GO:0005525
Aed1g2038 308 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 142 148 IPR017975 GO:0005525|GO:0005874|GO:0007017
Aed1g2038 308 CDD alpha_tubulin 2 294 - -
Aed1g2038 308 SUPERFAMILY Tubulin C-terminal domain-like 154 295 IPR008280 -
Aed1g2038 308 Gene3D Helix hairpin bin 243 295 IPR023123 -
Aed1g2038 308 PRINTS Alpha-tubulin signature 120 128 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Alpha-tubulin signature 88 101 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Alpha-tubulin signature 148 160 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Alpha-tubulin signature 18 33 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Alpha-tubulin signature 45 58 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aed1g2038 308 PANTHER TUBULIN 154 304 IPR000217 GO:0005874|GO:0007017
Aed1g2038 308 Gene3D - 154 242 IPR037103 -
Aed1g2038 308 SMART Tubulin_4 49 248 IPR003008 GO:0005525
Aed1g2038 308 PANTHER TUBULIN 1 153 IPR000217 GO:0005874|GO:0007017
Aed1g2038 308 PANTHER TUBULIN ALPHA CHAIN 1 153 - -
Aed1g2038 308 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 159 IPR036525 -
Aed1g2038 308 MobiDBLite consensus disorder prediction 289 308 - -
Aed1g2038 308 Coils Coil 277 297 - -
Aed1g2038 308 SMART Tubulin_C_4 141 252 IPR018316 -
Aed1g2038 308 PANTHER TUBULIN ALPHA CHAIN 154 304 - -
Aed1g2038 308 PRINTS Tubulin signature 134 152 IPR000217 GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Tubulin signature 53 72 IPR000217 GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Tubulin signature 95 106 IPR000217 GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Tubulin signature 108 132 IPR000217 GO:0005874|GO:0007017
Aed1g2038 308 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2038 Aed-Chr1 17155453 17157806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2038 K07374 - mjv:108395345 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2038 1 17155453 17157806 Aed1g2038 1 17155453 17157806 ECH
Aed11g1519 11 19459126 19460989 Aed1g2038 1 17155453 17157806 PCT