Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2034 ATGTTGCAAACCCTAGGAAGCGTAATTCCATGCTTCGTGAATAGTTCATGGCTCAGAAACCTAACGGTGCGTGCAATGGCATTCTCTTCCTCCTCCTCCTCCGACCAGTCACGTGGTGGCCTTCCCCGCTTCTTCTCCGAAACTCTTCCTCCTTCCAAGGCACTCTCTGCTTCTTTCACAACTCTGTATGTGCAATGTGCATGCCTTTTGTTTGGTTTGGTTAAGATAGTTTTTTTAGTTTATTTATTTTTACCTGGGATGTTGCAGGGTAGTGTTATACGCGTGCAAGGTGATGAATTCTGGCATATGACAAAAGTTTTGAGGTTGACCACCAATGATAGGGTACAGCTCTTCAATGGGAAAGGAAGTCTGGTAGAAGGATGCATACAGAACATTGATCGCAGTGGACTTGATTTTGTTGCATTGAATGATTTGATAACAGTACCTCCACAAAATACACAATTGCATGTATTTGCTGGTTTTGGTACTCTAAAGGGTGGCCGTGCTGACTGGCTTCTAGAGAAATGCACAGAACTTGGAGCCAATAGTGTTACTCCTCTATTGACTGAACGTTCTCCATCAATCTCAGAAAACCGGGTGGACAGATTGGAACGGGTCATTTTAGCAGCATCCAAACAATGTCAACGACTGCATGAAATGGCCCTGAAACATCCTATAGAGATTGATGACCTTTTGCACCTTATTGCACAATCAAAGCTATCTCTTGTTGCAACAGCGAAGGCAACTCCTGTTCTTAGTGCATTGACGTCATTGGAAAAGGAAACTAGTGGCTTAATCATAATTGGACCAGAAGGAGATTTCACTGAGAAAGAAGTGAGTATGATGATGGAAGCAGGTGCTACAGCTGTTAGTCTTGGACCTCATCGTCTTCGGGTTGAAACTGCCACAATAGCACTTTTGGCAACTGTAATGTTATGGTCTGACTCGCAGCAAACTTCAGCCTGTTGA 969 0.4376 MLQTLGSVIPCFVNSSWLRNLTVRAMAFSSSSSSDQSRGGLPRFFSETLPPSKALSASFTTLYVQCACLLFGLVKIVFLVYLFLPGMLQGSVIRVQGDEFWHMTKVLRLTTNDRVQLFNGKGSLVEGCIQNIDRSGLDFVALNDLITVPPQNTQLHVFAGFGTLKGGRADWLLEKCTELGANSVTPLLTERSPSISENRVDRLERVILAASKQCQRLHEMALKHPIEIDDLLHLIAQSKLSLVATAKATPVLSALTSLEKETSGLIIIGPEGDFTEKEVSMMMEAGATAVSLGPHRLRVETATIALLATVMLWSDSQQTSAC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2034 322 Pfam RNA methyltransferase PUA domain 96 140 IPR046887 -
Aed1g2034 322 TIGRFAM TIGR00046: RNA methyltransferase, RsmE family 91 311 IPR006700 GO:0006364|GO:0008168
Aed1g2034 322 CDD RsmE-like 155 308 IPR046886 -
Aed1g2034 322 SUPERFAMILY PUA domain-like 88 140 IPR015947 -
Aed1g2034 322 Gene3D - 82 321 IPR029026 -
Aed1g2034 322 SUPERFAMILY alpha/beta knot 153 314 IPR029028 -
Aed1g2034 322 Pfam RNA methyltransferase domain 153 310 IPR046886 -
Aed1g2034 322 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 41 319 IPR006700 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2034 K09761 - gmx:100777253 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2034 1 17125115 17127707 Aed1g2034 1 17125115 17127707 ECH