Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2021 ATGAAGGTTGGTGCAGAAAGCTGCAACATCTTGTTGCTGTTCATTACCTCTTACCTTTTACTGATCTCAGGGCTTGGTGTCCATTCTTTGTCTTATGATCATTCTGCTACTACAAAGGCAATAATTAACACTTCCTCATCAATAGTTTCGTATACTAAAATATTCTTTCTAATTAAGTTGCAAAATTGCTTGAGAGAACCTCGTAGAGCACAGTATGGAGGAGGCATTATAGTAAATCCAGGATTTGATCACAACATAGAGGGTTGGACAGTGTTTGGAAAAGGAGCTATCAAGGAACGAATATCGAATGGAGGCAATAGATTCATTGTTGCTCACAACAGAACACAACCATTGGATAGTTTCTCTCAGAAGGTCCAACTTAAGAAAGGAAGGCTATACACCTTTTCTGCTTGGCTTCAGGTTAGTGAAGGAAGTGACACTGTGTCAGTTATGTTTAAAACAAAAGGAAGTAATGAAATGGTACGAGGTGGCCAAGTGATAGCAAAGCATGGATGCTGGACCCTTCTAAAAGGAGGCATAGCTGCAAACTTTTCAAGCCCTGTGGAAATTCTTTTTGAGTCTAATTTTGCATATTTTCACAAAATTGAACTCAAAGCAAGAATTCCAGTGTGGAAGTATGGGCTGACAATATCTCCTTACAACCATATACTAAAAAGCAGTGGAGATCACTACAAGACGCTAGCACTGAGAGGGTAA 717 0.3933 MKVGAESCNILLLFITSYLLLISGLGVHSLSYDHSATTKAIINTSSSIVSYTKIFFLIKLQNCLREPRRAQYGGGIIVNPGFDHNIEGWTVFGKGAIKERISNGGNRFIVAHNRTQPLDSFSQKVQLKKGRLYTFSAWLQVSEGSDTVSVMFKTKGSNEMVRGGQVIAKHGCWTLLKGGIAANFSSPVEILFESNFAYFHKIELKARIPVWKYGLTISPYNHILKSSGDHYKTLALRG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2021 238 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 52 196 - -
Aed1g2021 238 Pfam Carbohydrate binding domain 75 178 IPR003305 GO:0016798
Aed1g2021 238 Gene3D - 65 207 - -
Aed1g2021 238 SUPERFAMILY Galactose-binding domain-like 73 183 IPR008979 -
Aed1g2021 238 PANTHER GLYCOSYL HYDROLASE 52 196 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2021 Aed-Chr1 17033928 17037257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2021 63 222 Glycoside Hydrolase AT4G33840 43.125 1.17e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2021 - - gmx:100802367 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2021 1 17033928 17037257 Aed1g2021 1 17033928 17037257 ECH