Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2005 ATGGTGGCTGCCATTTCGGAAGACCCATTGACCTCTTCTAATGGCTCCATACCCAGAAGACCAAAGGGTAGACAAGTTTCTTCAAGGTACATGTCTCACTCACCTTCACCTTCACCTTCTTCAACCACTACTACAACAACAACTACTACTACTACAACCACAACTTCAACCTCAACAACATCAACAACGAGTTCCTCTTCTCGTCGATTCCCTTCACCTCTTCTCTCGCATTCCACCAATTCCTCCACCCCTTTGCTCCCTAAGCGTTCCCAATCGGTGGACCGCCGCCGCCCGCGCCCCGCCACGCCGCTTCCCGAGGCGGCCAAGCTTCTCGTGACTTCCACTCGGAGCCTGTCGGTTTCCTTTCAAGGTGAGGCCTTTTCGCTGCCCGTTAGTAAGACCAAGGCCGCCGCCGCCACCCCTCCGCCGCGGAAGGCCGCCACGCCGGAGCGCCGGAGGGCCACTCCGGTCAAGGGGGAGAATTCCAGGCCGTCGGATCAGCACCGGTGGCCGGCGAGGACCCGTCAAGTGGATCATCTGTCGAAGAGTGTGGATATCAGTGATAAGAAGAAGGTTGTTGGGAATAATGGGTTTGGTAAAGTGGTGAGGGCTTTGCAGCAATCAATGGTGGTGGAGGGTGAGACAAGGAGAGCTTCTTTTGATGGGTTAGGAAGGTTGAGTTTGGATTTGGGAAAAGCTGAGTTGTTGAAGGGTAATAGTAATACTAATGCTAATAATCATAGTAATAATAATGATGGTGTGAATTTGGTGAGTAAGTCTTCATTGGCTTCTGATCTCACTGCTTCTGATACTGATAGTGTTTCCTCTGGGAGCACTTCAGGAGCACATGACTCTTCTGGCTCTGGGGCTGCCAAGGGCCCTAAGGAGCCTCGTGGCATTGTTGTGTCTGCCAGGTTTTGGCAGGAAACTAATAGCCGGATGCGTCGCCTTCAGGACCCCGGTTCACCCTTGTCGCCCAGCCCTGCTTCTAGAATTGGGGTGCCAAACAAGAATGCTCAATTGAAAAGGTATAATAGTGATGGTCCCATGTTGTCACCGCGAACCTTGGCTTCTCCTGTCAGGGGGAGTGTGAATGCTCGGCCTGCTTCGCCGAGTAAGCTTTGGGCCGGATCATCCCCATCCAGGGGGATTAGTCCTTCTAGGGTGAGGAGCACGGTTGCCAGCTCCATCAATAGTGGTTCAGGTAACACACCCTCAATTCTTAGCTTCTCTGCCGATGTGCGGAGAGGGAAGATTGGAGAAGATCGGATATTTGATGCGCATACGTTGAGGCTTCTGTATAACCGCTATGTGCAGTGGCGGTTCGTGAATGCAAGGGCAGATGCTACATTTATGGTGCAGAAACTGAATGCTGAGAGACATTTGTGGAATGCATGGGTAACAATCTCAGAGCTTCGGCATTCAGTCATACTCAAAAGAATCAAGCTTGTGTTACTGAGGCAAAAGTTGAAGTTAACTTCCATTCTAAAAGGACAGGCTGATGTTCCAAATCTAAAGGATGCTTTGGGGTCAGCAGTTGATGTGATGCAGGCAATGGCATCCTCAATATACACTCTTTCTTCAAAGGTGGAAGAAACTAACTGCTTGGTGGCGGAAATCCTAAAGGTAACCTCAAAAGAAAGGTTTTTGCTTGAACATTGCACGGAGTTTTTGTCCTCATTAGCAGCCATGCAGGTCAAGGATTGTAGCTTAAGAACGCATACGTTACAACTTTCTCGTGTGCCAACTTCCAGCTGCCTGACAACACGTGTGTAG 1776 0.5034 MVAAISEDPLTSSNGSIPRRPKGRQVSSRYMSHSPSPSPSSTTTTTTTTTTTTTTSTSTTSTTSSSSRRFPSPLLSHSTNSSTPLLPKRSQSVDRRRPRPATPLPEAAKLLVTSTRSLSVSFQGEAFSLPVSKTKAAAATPPPRKAATPERRRATPVKGENSRPSDQHRWPARTRQVDHLSKSVDISDKKKVVGNNGFGKVVRALQQSMVVEGETRRASFDGLGRLSLDLGKAELLKGNSNTNANNHSNNNDGVNLVSKSSLASDLTASDTDSVSSGSTSGAHDSSGSGAAKGPKEPRGIVVSARFWQETNSRMRRLQDPGSPLSPSPASRIGVPNKNAQLKRYNSDGPMLSPRTLASPVRGSVNARPASPSKLWAGSSPSRGISPSRVRSTVASSINSGSGNTPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLVLLRQKLKLTSILKGQADVPNLKDALGSAVDVMQAMASSIYTLSSKVEETNCLVAEILKVTSKERFLLEHCTEFLSSLAAMQVKDCSLRTHTLQLSRVPTSSCLTTRV 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2005 591 MobiDBLite consensus disorder prediction 267 299 - -
Aed1g2005 591 MobiDBLite consensus disorder prediction 372 387 - -
Aed1g2005 591 PANTHER AUGMIN FAMILY MEMBER 501 589 - -
Aed1g2005 591 MobiDBLite consensus disorder prediction 7 89 - -
Aed1g2005 591 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 14 499 - -
Aed1g2005 591 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 501 589 - -
Aed1g2005 591 Pfam QWRF family 273 500 IPR007573 -
Aed1g2005 591 Pfam QWRF family 499 552 IPR007573 -
Aed1g2005 591 MobiDBLite consensus disorder prediction 1 107 - -
Aed1g2005 591 MobiDBLite consensus disorder prediction 267 286 - -
Aed1g2005 591 MobiDBLite consensus disorder prediction 313 387 - -
Aed1g2005 591 MobiDBLite consensus disorder prediction 313 345 - -
Aed1g2005 591 MobiDBLite consensus disorder prediction 146 182 - -
Aed1g2005 591 MobiDBLite consensus disorder prediction 132 182 - -
Aed1g2005 591 PANTHER AUGMIN FAMILY MEMBER 14 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2005 Aed-Chr1 16930239 16936066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2005 - - gmx:100815206 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2005 1 16930239 16936066 Aed1g2005 1 16930239 16936066 ECH