Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2003 ATGACAATATCTAAACACAGTTTTTCTCGAATTGACACATTGGAGCTGAAAGCTCTAATTGTTCGGAAGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAGCTTCGAAGATTGTTGAGTTCAAAGATAAGCAAGTCAGAGTTTGACAGGATTTGCATTGTGATTATTGGGAGGGAAAATATCCCTCTTCACAACCGACTCATTAGAGCGATTCTGAAGAATGCTTGTCTGGCTAAAGTCCCACCTGTGAGAGGCTCTCCAAGAGTTGGGAGTGCCATCAGTGCAAAAGATTCAAATGGGTCGCAGAGAGGCTCTATTCAGTCGCTGTTTGGGGAAGCATTTCCTCCTTCCATGCGGAGGATGGGCTCTTTGGCTGCTCGAGACCATAGGTTCAAGGGCCGCCAAAATGCTTTTGGACCGCGGGGCAAGCCCCATTTTGGTCTTGCACCTGAAGAATTGATATGTAAGACATTGGAGCAGCAGAGTGCGACAGAACTGAATTCCCTTGGCAGTAGACCGCCGATTTCTGTTGAAGAGGGAGAGGAGGTTGAACAGATGGCTGGAAGCCCCAGCATTCAAAGTAGGAGTCCAGTTACAGCTCCTCTTGGTATATCCATGAATTTTGGTCGTGGTCCTAGACTTCATTCTAATGTATCATTATGTAGCAAAGATTATCCTGAGACCTGTCACATCAATGGGCATCTCCCCGACACTAGATCTTTGAGGAGTCATTTGGAGCAAAAGTTGGAGAAGGAGGGTTTAACTGCGACAGTGGATTGTGTAAATCTATTGAATAATGCACTGGATTCGTATCTGAAGAGGTTGATTGAGTCCTTTATGGATTTAGCTGGATCAAGATTTAGAAATGAGCATCTAAGACAGCAAAACAGACAGTTGGTAACCAGTTCAAATGTATTACTACCTGGAAGATGTATGCAGACAGCAACAAGATCTGCCAGTGCATCTGTTTTAGATTTCCGTCTTGCAATGGAGTTAAATCCACAAGTTCTTGGACCAGATTGGCCAATACAACTTGAGAAGATTTGCATACGTACCTCTGAAGAGTGA 1071 0.4426 MTISKHSFSRIDTLELKALIVRKVGHQRADKYFDQLRRLLSSKISKSEFDRICIVIIGRENIPLHNRLIRAILKNACLAKVPPVRGSPRVGSAISAKDSNGSQRGSIQSLFGEAFPPSMRRMGSLAARDHRFKGRQNAFGPRGKPHFGLAPEELICKTLEQQSATELNSLGSRPPISVEEGEEVEQMAGSPSIQSRSPVTAPLGISMNFGRGPRLHSNVSLCSKDYPETCHINGHLPDTRSLRSHLEQKLEKEGLTATVDCVNLLNNALDSYLKRLIESFMDLAGSRFRNEHLRQQNRQLVTSSNVLLPGRCMQTATRSASASVLDFRLAMELNPQVLGPDWPIQLEKICIRTSEE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2003 356 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 283 IPR024738 GO:0070461
Aed1g2003 356 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 356 IPR024738 GO:0070461
Aed1g2003 356 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2003 Aed-Chr1 16919585 16921875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2003 - - gmx:100817344 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2003 1 16919585 16921875 Aed1g2003 1 16919585 16921875 ECH