Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2002 ATGAACCCTGGCAAGATTTCCCATGCCATGATGCAGAGGCAGTTCATGTTGGTGAACCGTCTCATTCATCCAATCAAAACCCCTTCTTTTCGAGTCCCACATTTCCTGAGGAAACCCAAAGAATATGGATTCTCTTCATCCTTTTGTTCTTCCTCTTCTTCTTCGTCTTCTTCATCTGCTGCTGCAACTTCCATCTCCAAGGTTGGCTTTGTGGGTTGGTATTTGGGGATGATTAAGTCGCGCCCAATTTTGACTAAAAGTGTTACTTCTGCACTTATTTACATCGCTGCTGATTTATCCTCCCAGACTATTGTGCGGGAATCTTCAGAACCTTTTGATTTTATAAGGACTGCACGCATGGCCGGATATGGGATGGTCGTTTTAGGACCATCACTGCATTTCTGGTTCAATTTTGTGTCAAAGCTTTTTCCAAGGAGGGATCTTTTCTCCACATTGAAGAAAATGGTCATGGGTCAGACACTTTATGGACCTGCCATGACCGTTATTTTCTTCTCCTTGAATGCACGGATGCAGGGTGAAACCGGCTCAGAGATTGTTGCACGCCTAAAACGCGATTTGCTCCCTACGATGCTAAGTGGAATTATGTACTGGCCTATATGTGATTTTATAACATTTAGGTTCATTCCTGTCCATTTACAGCCATTAGTCAGCAATTCATTTTCGTACCTGTGGACCGTTTATATGACCTATATGGCAAGCCTACAGAAAGCAACTTGA 738 0.4322 MNPGKISHAMMQRQFMLVNRLIHPIKTPSFRVPHFLRKPKEYGFSSSFCSSSSSSSSSSAAATSISKVGFVGWYLGMIKSRPILTKSVTSALIYIAADLSSQTIVRESSEPFDFIRTARMAGYGMVVLGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVIFFSLNARMQGETGSEIVARLKRDLLPTMLSGIMYWPICDFITFRFIPVHLQPLVSNSFSYLWTVYMTYMASLQKAT 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2002 245 Pfam Mpv17 / PMP22 family 177 235 IPR007248 GO:0016021
Aed1g2002 245 PANTHER OS12G0508100 PROTEIN 19 244 - -
Aed1g2002 245 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 19 244 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2002 Aed-Chr1 16915912 16919375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2002 28 243 Miscellaneous Gene Families AT2G14860 66.204 9.18e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2002 K13348 - gmx:100810534 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2002 1 16915912 16919375 Aed1g2002 1 16915912 16919375 ECH