Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2001 ATGGCACCTTTCATTTCCATCTCTTTGTTGTTGTTTCTCTTTGTCAATTACCCTCTCCTATCCCTCTCAACCAACCCTGAAGGGATCGCTCTGCATACTTTGAGAAGCAGGCTTTCTGATCCCAACAATGTGTTGCAGAGTTGGGACCCAACTCTGGTTAATCCCTGTACTTGGTTCCATGTTACCTGCGACTCCAACAATCATGTAATTCGCTTAGACTTGGGCAACTCTAACGTTTCTGGAACTCTGGGCCCAGAACTTGGCCAGCTACAGCATCTGCAGGAGCTCTACAGGAATGACTTAACAGGAAAGATTCCTAAGGAACTTGGCAAGTTGAAATCACTTATTAGCATGGATTTGTATGATAACAAGTTTGAGGGGAAGATTCCAAAGTCATTTGGAAAACTGAAGTCACTTAAATTCCTGCGGCTAAACAACAACAAGTTGACAGGATCCATCCCAAGAGAACTCACTCATCTCACTGATCTCAAAATCTTTGATGTTTCCAATAATGATCTCTGTGGAACAATACCAGTTGAGGGCAACTTTGAATCTTTCCCAATGGAAAGTTTTGAAAACAACAGGTTTAGTGGTCCCGAACTGAAAGGACTTGTTCCATATGATTTTGGATGCTGA 636 0.4245 MAPFISISLLLFLFVNYPLLSLSTNPEGIALHTLRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQELYRNDLTGKIPKELGKLKSLISMDLYDNKFEGKIPKSFGKLKSLKFLRLNNNKLTGSIPRELTHLTDLKIFDVSNNDLCGTIPVEGNFESFPMESFENNRFSGPELKGLVPYDFGC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2001 211 Gene3D Ribonuclease Inhibitor 24 202 IPR032675 -
Aed1g2001 211 SUPERFAMILY L domain-like 25 199 - -
Aed1g2001 211 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 208 - -
Aed1g2001 211 Pfam Leucine rich repeat 115 173 IPR001611 GO:0005515
Aed1g2001 211 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Aed1g2001 211 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 7 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2001 Aed-Chr1 16912296 16915203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g2001 5 194 Receptor kinase-like Gene Family AT1G71830 60.417 2.75e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2001 - - gmx:100816279 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2001 1 16912296 16915203 Aed1g2001 1 16912296 16915203 ECH