Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1992 ATGGCAATCGACATCGAAACCTTGGAAGGCAGGTATATTGATTTTTGCAGGAGACACGATGCTTTGCCTAATTCTTCTATTTTGTCAAGCCTTTTCAAGGCTGAGGTAAAAAAGTCCAACCATGAGCTGTGCAGCCTGGAGATTTTAATTGATGACCTAAAGGATGTTGATATTGCTCCACTTCTTGACTTGTGCATGATCTTTGATACTTCTGAAATAGAGGCTGTTGATGTACGTAATGAATCATCATGTGTATTAAATGGAGAATATGCATTATCATTGATGCGTGCTATTAATCAAAAGCTTCGAGTAGTCCATCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATTTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGTTCACGTTTCCGGAAGCTGAACTTAATGGGGGAGTTCATGCATATACACACCCTAAATCTTGATTTCAGTTCTTCCCTAACCAGTTTCCAGGAAGACTGTTTTAATTGTATGCCCAACCTAATGCGCCTCTCAATGTGTGATACACGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTGATTGAATTAAGGTTTCAATATTGGCAATATTGCAATGAATCCAATGATGCTGTGACATCTTTTATCTCATCCAGTGGGAAGTCTGATGACACTCCTGATTTTAGCCTGCTTGATAGAGTTCCTTTTATTGGTGAACCCTACACCGATACAACAGAACTCACAGATCCTAACTTTAGTGCTGAAGATCCTATTAGAAATTTTTATTCCTTTGATGAAGAAGTTATAAATCATGATGTTCAAAGCATGGTTGAGGATTCATCAGATGATAGTGAAGTTGACTCTACTAGTCATCGTCATAAATACTGGTTGTCAGATGTTTTTCCTGGGTGGAGTTCAGAAGTTCCTCTTCAGAATGAGGTAGTCAACTTGGTCACTCCCCCCCCGCCAAATGAAGATGGAGAAGAGTCATTGCAAGGTGCTTTTGCAGACAGTATTGCTGATGTTTCTATGAAGTACATGTCTCGTCATGCATCGCCAATATGCTATGAGAAACATTACAGAGAGTTCATGATAGCTTCATTACCAAATCTAAAAAATCTAGATAATATGCCAATCAGAAAGATTGACAAGGAAAGGGCTACCGGAATATTTTCTCAATACTTTGAATATCTTCCATATAAATGGAAGCACAAAGAGAGTGTTGTAAGTATCTTACAGAAGAGAGAAATAAAATCAGGCCACAAGAAGGTGCAATCTTCTAAGCATAGGCCATCATATCCTTCTGGAAAGTCTCAATATTTTTATACTAGGTCTCTTTCTGCTGCTAAATTGGGGTCTTCAACTTGGCCTATTTTGCATCCCCTTTCTCTATTAGGATGTGAATTGGACAAAGGTTTTCATCCAAGGCAGTTTGAGTACCATCCATCCGACTCCAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATCAACCATGAGACAGAACATATTGTGAGTTATATCCCGTCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTAAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCAGATACCAAGAAAAGTTACTGGCATAAATGGGAATTTTGGTTGTGTTAACTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCAAGAAATGTTGCTTTATATGACATCAACAGCGGGAAGCGCTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAGTTTGCTAATCATTCCCCATCAATTTTTGCCACTTCATCATTTGATCACGATGTCAAGATGTGGGACTTGAGACAAAAACCAATACACCCTTGCTTCACTGTTTCAAGCGCCAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCATCAGCGGTTGATAATGAGGTGGGGATTTTCACTCAGTAG 2076 0.3902 MAIDIETLEGRYIDFCRRHDALPNSSILSSLFKAEVKKSNHELCSLEILIDDLKDVDIAPLLDLCMIFDTSEIEAVDVRNESSCVLNGEYALSLMRAINQKLRVVHLQDLSFGKDFLRDISQRGLACQVLTLRCSRFRKLNLMGEFMHIHTLNLDFSSSLTSFQEDCFNCMPNLMRLSMCDTRITNLWTTVAALSKLPSLIELRFQYWQYCNESNDAVTSFISSSGKSDDTPDFSLLDRVPFIGEPYTDTTELTDPNFSAEDPIRNFYSFDEEVINHDVQSMVEDSSDDSEVDSTSHRHKYWLSDVFPGWSSEVPLQNEVVNLVTPPPPNEDGEESLQGAFADSIADVSMKYMSRHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATGIFSQYFEYLPYKWKHKESVVSILQKREIKSGHKKVQSSKHRPSYPSGKSQYFYTRSLSAAKLGSSTWPILHPLSLLGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHETEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHQIPRKVTGINGNFGCVNFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTVSSARGNVMVCFSPDDQYILASAVDNEVGIFTQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1992 691 ProSiteProfiles Trp-Asp (WD) repeats profile. 614 649 IPR001680 GO:0005515
Aed1g1992 691 SUPERFAMILY RNI-like 97 224 - -
Aed1g1992 691 PANTHER BNAC09G30780D PROTEIN 1 686 IPR046377 GO:0071493|GO:0080008
Aed1g1992 691 SMART LRRcap_2 363 381 IPR003603 -
Aed1g1992 691 SMART WD40_4 652 690 IPR001680 GO:0005515
Aed1g1992 691 SMART WD40_4 606 647 IPR001680 GO:0005515
Aed1g1992 691 SMART WD40_4 564 603 IPR001680 GO:0005515
Aed1g1992 691 SMART WD40_4 510 552 IPR001680 GO:0005515
Aed1g1992 691 Gene3D Ribonuclease Inhibitor 91 238 IPR032675 -
Aed1g1992 691 Gene3D - 480 691 IPR015943 GO:0005515
Aed1g1992 691 Pfam WD domain, G-beta repeat 618 647 IPR001680 GO:0005515
Aed1g1992 691 SUPERFAMILY WD40 repeat-like 481 689 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1992 - - gmx:100806443 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1992 1 16845512 16854385 Aed1g1992 1 16845512 16854385 ECH