Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1977 ATGATCAAGCATGCTCTTTGTTTCATAGCATTCCTATCTGCACTGCATGCAACACATGCAGTTGAATACACTGTCACTAACAACGCAGTGACAACTTCTGGCGGTGTGGCTTTCCGTGACAAAATAGGAGCAGAATACGCGAAGCGAACACTAGACACTGCGACCCAATTCACATGGAGGGTCCTTCAGCAAAACAACCCTTCCGAGAGAAAAAATGTTCAGAAGGTAAGCTTATTCGTTGATGACATGGATGGGGTTGCATACACTAGCAGCAACCAGATCCATCTCAGTGCAAGATATGTTGGAAACTACAAAGGGGACGTGAAAAGAGAGACAACAGGGGTGCTCTATCATGAAATGGTGCACGTTTGGCAGTGGAATGGGAATGGTCGTGCTCCTGGTGGTTTAATTGAAGGTGTTGCTGACTATGTGAGGCTCAAGGCAAACTATGCACCTAGCCACTGGAAAAAAGCAGGGGAAGGACAGAGATGGGACCAGGGTTATGATGTTACTGCTCATTTTCTTGACTATTGTGACTCTCTCAGAACTGGCTTTGTGGCACAACTCAACAGCCAGTTGCGGACTGGTTATAGTGATCAACTCTTTGTTCAGCTATTGGGAAAGACTGTTGATCAGCTTTGGCAAGACTACAAGGCCAAGTATGGCAATTTACCCTAG 678 0.4602 MIKHALCFIAFLSALHATHAVEYTVTNNAVTTSGGVAFRDKIGAEYAKRTLDTATQFTWRVLQQNNPSERKNVQKVSLFVDDMDGVAYTSSNQIHLSARYVGNYKGDVKRETTGVLYHEMVHVWQWNGNGRAPGGLIEGVADYVRLKANYAPSHWKKAGEGQRWDQGYDVTAHFLDYCDSLRTGFVAQLNSQLRTGYSDQLFVQLLGKTVDQLWQDYKAKYGNLP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1977 225 PANTHER BASIC SECRETORY PROTEASE 7 221 - -
Aed1g1977 225 Pfam Peptidase of plants and bacteria 21 217 IPR007541 -
Aed1g1977 225 PANTHER - 7 221 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1977 Aed-Chr1 16775775 16780638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1977 - - gmx:100499938 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1977 1 16775775 16780638 Aed1g1977 1 16775775 16780638 ECH