Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1975 ATGGGGATGATGCAGAGATTGTTGGCGACCGTGGGAATTGCTGTTTCCATACTGTCTGGAAACAGAAACACTGTTGTTCAGAGCTTTCACAACCCTAAACCAAAACAACAACATACTACTACTTTCTGTCAAGACCTCATTATTCCCTCCGGTTACCCCTGTTCCCAGTATACGATTGAAACGAAGGATGGCTTCTTGTTAGGTCTTCAACGCGTGTCTTCTTCTTCTCTTGGGCTTAATGGAGAACGAGGCCCTCCGGGGAAGCAGAGTTCTTCAACTGATCTTGTCATTAGTGCAGGAGAAGATGCATGGTTTCTAAATAGTCGAGACCAATCACTTGTCTTCATACTTGCGGATCATGGTTTTGATGTTTGGGTAGGAACACATTGGAGCAACAGGTGTTACAAAGAGAATAATAGGAATCAATTTTGGGATTGGAGTTGGCAGGATTTAGCCATGTATGATCTTGCAGAAATGATGAATTACATTAATTCAGTAACAAACTCAAAGCTATTTGTACTCGGGCATTCGCAGGGTAAAAAGGTTGAAGCTGCAGCAGCTCTTGTACAACTGAACCACAAAAGGTTTGATATTTCAGTTTTCCTCTTCTTCTTTTCTAGCTAG 624 0.4215 MGMMQRLLATVGIAVSILSGNRNTVVQSFHNPKPKQQHTTTFCQDLIIPSGYPCSQYTIETKDGFLLGLQRVSSSSLGLNGERGPPGKQSSSTDLVISAGEDAWFLNSRDQSLVFILADHGFDVWVGTHWSNRCYKENNRNQFWDWSWQDLAMYDLAEMMNYINSVTNSKLFVLGHSQGKKVEAAAALVQLNHKRFDISVFLFFFSS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1975 207 PANTHER TRIACYLGLYCEROL LIPASE 1 30 188 - -
Aed1g1975 207 Pfam Partial alpha/beta-hydrolase lipase region 44 76 IPR006693 GO:0006629
Aed1g1975 207 Gene3D alpha/beta hydrolase 29 204 IPR029058 -
Aed1g1975 207 PANTHER LYSOSOMAL ACID LIPASE-RELATED 30 188 - -
Aed1g1975 207 SUPERFAMILY alpha/beta-Hydrolases 44 179 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1975 Aed-Chr1 16765702 16767661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1975 41 190 Acyl Lipid Metabolism Gene Families AT2G15230 51.613 4.17e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1975 K01052 - gmx:100803830 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1975 1 16765702 16767661 Aed1g1975 1 16765702 16767661 ECH