Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1961 ATGGCTTCCGAGGACAGAAACGAAGAGCTTCACGTTCTATTGGTGGCATTTTCAGCCCAGGGTCACATCAACCCTTTACTTAGGCTAGGCAAAAAGCTACTAAGCAGAGGCCTCCACGTCACCCTCGCCACCACCGAATTAGTTTACCACCGCGTCTTCAAGCCCTCCGCCACCGCCGCCATCCCCACTTCTATCACCACCAACGGAATCCAAGTGGTTTTCTTCAACGACGGCTTTGGAACCGGCCAGGACAACAACAAGACCACCACTCCCGACCAATACATGGATCTCATAGGAACATTCGGACCCGTCAGCCTCTCCAACATCATCAAAGACCACTTCCTTAACAAAGGTTCCAAAAAACTCGCTTGTATAATCAACAACCCCTTTGTCCCATGGGTTGCAGATGTAGCTGCCGACTTCAACATCCCATGTGCATGTCTCTGGATCCAACCCTGTGCTCTCTACGCCATATACTACCGTTTCTACAACAACCTTAACAAATTCCCCACACTTGAGGACCCTTCAACGAGTGTCGAGTTGCTAGGTCTCCCATTACTACAACCCCAAGACCTTCCTTCTTTCGTTCTCCCGTCAAACCCCCATGGAAACATGCCCAAGGTGCTGTCTTCGATGTTCCAGCACATGAAGAAGCTCAAGTGGGTACTCGCCAACTCCTTCTACGACCTGGAGAAAGAGGTGATAGACTCCATGGCCGACTTGTGCCCCATAACAACGGTGGGCCCACTGGTCCCACCATCGTTACTCGGCCGAGATGACGAAGAGGAAGACGTTGGAATCGAAATGTGGAAGCCACAGGACTCGTGCATTGAGTGGCTCAACCAGCATCCTCCTTCTTCGGTCATCTACGTTTCTTTTGGGAGCATCACTGTGTTAAACACTAAACAGTTGGAAAGCATAGCGAAGGCGCTGAGGAACAGCAAGAAGCCTTTTCTTTGGGTGATTAAGCGGGGAGAGGGAGAAGAAGCGCTTCCACTTCCAGAAGGGTTTGTTGAAGAGAGCAGAGAGCAAGGGATGGTGGTGCCGTGGTGCCCGCAAACGAAGGTGTTGAGTCACCCTTCGATAGCGTGTTTCTTAACGCACTGTGGATGGAACTCTATGTTGGAAGCTATCGCTGCGGGCACGCCCATGATTGCATGGCCGCAATGGACCGACCAACCAACTAACGCGAAACTGATTTCGGATGTGTTTCGTCTGGGGATTCGGCTCACGCAGGAGACTGACGATGGGTTCGTTGCCACGGAGGAAGTGGAAAGGGCTTTTCAACGGATTTTCGCGGCGGATGAGTTTAAGAGAAATGCGTTTCAGCTCAAACGGGCAGCGAGAGAGGCGGTGGCTCACGGTGGGTCGTCGGACCAGAATATCCAATCCTTCGTGGATGAAATTCTTCGGACAAAGTTTTGA 1425 0.5165 MASEDRNEELHVLLVAFSAQGHINPLLRLGKKLLSRGLHVTLATTELVYHRVFKPSATAAIPTSITTNGIQVVFFNDGFGTGQDNNKTTTPDQYMDLIGTFGPVSLSNIIKDHFLNKGSKKLACIINNPFVPWVADVAADFNIPCACLWIQPCALYAIYYRFYNNLNKFPTLEDPSTSVELLGLPLLQPQDLPSFVLPSNPHGNMPKVLSSMFQHMKKLKWVLANSFYDLEKEVIDSMADLCPITTVGPLVPPSLLGRDDEEEDVGIEMWKPQDSCIEWLNQHPPSSVIYVSFGSITVLNTKQLESIAKALRNSKKPFLWVIKRGEGEEALPLPEGFVEESREQGMVVPWCPQTKVLSHPSIACFLTHCGWNSMLEAIAAGTPMIAWPQWTDQPTNAKLISDVFRLGIRLTQETDDGFVATEEVERAFQRIFAADEFKRNAFQLKRAAREAVAHGGSSDQNIQSFVDEILRTKF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1961 474 Gene3D Glycogen Phosphorylase B; 15 462 - -
Aed1g1961 474 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 9 471 - -
Aed1g1961 474 Gene3D Glycogen Phosphorylase B; 264 450 - -
Aed1g1961 474 CDD GT1_Gtf-like 10 458 IPR002213 GO:0008194
Aed1g1961 474 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 284 446 IPR002213 GO:0008194
Aed1g1961 474 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Aed1g1961 474 PANTHER GLYCOSYLTRANSFERASE-RELATED 9 471 - -
Aed1g1961 474 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1961 Aed-Chr1 16694916 16696340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1961 7 469 Glycosyltransferase AT2G23260 43.552 2.74e-133 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1961 K13692 - gmx:100778995 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1961 1 16694916 16696340 Aed1g1961 1 16694916 16696340 ECH