Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1946 ATGCAAAATATTGTTATAGTGCCTCTCTCTCTATCAAATACTCTGTTCTGTCTTCTCTTCGTTAGTTCTAGCTCCATTTATTTTTGTGCTAAAAAAAGAACCAGGGAAATGGGTGCTCTTGATTTCCTTTCAGATTACTTCTCAGTTTCCACCCATAAAAAGAAACGCAAACCAATGCAGACAGTTGAAATCAAAGTGAAAATGGACTGTGATGGCTGTGAAAGAAGAGTTCGAAATTCTGTTTCCAACATGTCAGGAGTGAAACAAGTGGAGGTGAGTAGAAAGCAAAGCAAGGTAACAGTGACAGGTTACGTGGATAGAAACAAGGTACTAAAGAAAGTGCAAAGCACGGGAAAAAGAGCAGAGTTTTGGCCATATATTCAATACAACTTGGTGGCATATCCGTATGTAGCGCAAGCATATGACAAGAAGGCACCATCTGGGTATGTGAAAAACACAGAACAAGCACTCCCCAACCCAAACGCACCGGATGAGAACCTCGCCTCCCTCTTCAGTGATGACAACCCTAATGCATGTTCAATCATGTAG 549 0.4135 MQNIVIVPLSLSNTLFCLLFVSSSSIYFCAKKRTREMGALDFLSDYFSVSTHKKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKQVEVSRKQSKVTVTGYVDRNKVLKKVQSTGKRAEFWPYIQYNLVAYPYVAQAYDKKAPSGYVKNTEQALPNPNAPDENLASLFSDDNPNACSIM 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1946 182 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 38 182 - -
Aed1g1946 182 ProSiteProfiles Heavy-metal-associated domain profile. 68 123 IPR006121 GO:0046872
Aed1g1946 182 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 38 182 IPR045181 GO:0046872
Aed1g1946 182 Gene3D - 46 125 - -
Aed1g1946 182 Pfam Heavy-metal-associated domain 65 119 IPR006121 GO:0046872
Aed1g1946 182 CDD HMA 63 122 IPR006121 GO:0046872
Aed1g1946 182 SUPERFAMILY HMA, heavy metal-associated domain 58 125 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1946 Aed-Chr1 16577195 16578151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1946 - - gmx:100798163 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1946 1 16577195 16578151 Aed1g1946 1 16577195 16578151 ECH