Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1853 ATGGGCTCTGCTTCTCTCATTCCAGTTTCCTCCTGGTTGCCTTCGCGGCTACTACCTTCTCCTTTCAAGGGGACGGTGAAAAGCTTAGTTGCAAAACCATGTGTGAAGATTCAGCGAGCAGCAAGACCCCTCTTTTCCGTGGTTAACATGGCTTCCTCTTCCCCCGTGGCAGCAGTAGCCAGCGTGGGCGTTCGGTTTCGGCTGGACAATTTGGGGCCACAACCGGGTTCGAGGAAGAGGGCAAAAAGAAAGGGTAGAGGAATATCGGCTGGGCAGGGAGCAAGTTGTGGTTTTGGGATGAGGGGTCAGAAATCTCGATCTGGCCCTGGCGTTAGAAAAGGTTTCGAAGGTGGTCAGATGCCACTCTATCGCCGAATCCCCAAACTCAGAGGAATTGCTGGAGGTATGCGTGCGGGATTGCCCAAATATGTTCATGTAAATCTGAGAGACATAGAAGATGCTAAATTTAAGGAAGGGGAAGAAGTGTCTCTAGAGACACTCAAGGTGAAAGGTGTCATTAACCCATCAGGAAGAGAAAGGAGACTTCCTTTGAAGATTTTGGGTGAAGGAGAACTGAGCAAGAAGTTGACATTCAAAGCCCGTGCCTTTTCCACATCAGCAAAGGAGAAACTTGAGAATTCTGGCAGTTCCCTCACTGTGCTTCCTGGCCGCAAGAAATGGGTTAAGCCATCAGTTGCTAAAAACCTTGCCCGTGCTGAAGAATACTTTGCCAAGAAGCGCGCCGCCGCCGCCGCCGCTGCTGCTGCCACCGAGCCGGCATCTGCTTGA 789 0.5133 MGSASLIPVSSWLPSRLLPSPFKGTVKSLVAKPCVKIQRAARPLFSVVNMASSSPVAAVASVGVRFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVHVNLRDIEDAKFKEGEEVSLETLKVKGVINPSGRERRLPLKILGEGELSKKLTFKARAFSTSAKEKLENSGSSLTVLPGRKKWVKPSVAKNLARAEEYFAKKRAAAAAAAAATEPASA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1853 262 MobiDBLite consensus disorder prediction 71 116 - -
Aed1g1853 262 Gene3D - 143 220 - -
Aed1g1853 262 SUPERFAMILY Ribosomal proteins L15p and L18e 69 220 IPR036227 -
Aed1g1853 262 PANTHER BNAA06G33230D PROTEIN 21 261 - -
Aed1g1853 262 Hamap 50S ribosomal protein L15 [rplO]. 68 221 IPR030878 GO:0003735|GO:0006412|GO:0015934
Aed1g1853 262 ProSitePatterns Ribosomal protein L15 signature. 185 215 IPR001196 GO:0003735|GO:0005840|GO:0006412
Aed1g1853 262 PANTHER 50S RIBOSOMAL PROTEIN L15 21 261 IPR005749 GO:0003735|GO:0006412|GO:0015934
Aed1g1853 262 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 92 217 IPR021131 -
Aed1g1853 262 TIGRFAM rplO_bact: ribosomal protein uL15 68 218 IPR005749 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1853 Aed-Chr1 15868822 15872198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1853 K02876 - gmx:100306183 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1853 1 15868822 15872198 Aed1g1853 1 15868822 15872198 ECH