Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1840 ATGCCCGAAATGGATGAGCGCGTGGTTATTCAGCAACCTCTCTCTGCCATAGCAGAAGCGTTTGAGGAACTGTCGAAGAGAATCAAAGAGAGGAAGAACAACGCCAACGAGATCCGCTTGGACACGTTCTGCGAGGCTGCGTCTCTCGTCTCCGTTCTCTTCCGCTGTCTCGGCCTCGCTTTCAAATTCGCTGAATTGGAATACGTCGCCAAGCTACATGGACTATTGGAAGCATCAAAGACATGTCCCACTCTACCGGATATTCTTAACATTGATGTCGCCAATGACACAGTGAAAACATCAGGAAGCTATTCACGCAATCTGCGTAGAGTTCGCCAGGGTCTTGATCTCGTCAGAGCTATATTCGAACAGCTTTTGTCAACTTACGATAGTTCTTTAAAAGACGTGGCTACAACAGCTTATGGACAGGTTTGTGCACCGTATCACACATGGGCAGTAAGAACAGCCGTATATGCTGGGATGTATACACTTCCAACGAGAGAGCAACTTTTGATGAAGCTCAATGAAACAGAGCAATCAGCTGAGAAGAAGATGAGAAGGTACATTGCTGCCACGCTTCCAATTATAGAATACATAGATAAACTGTACCTTTCTCGAAATATTAAGTTGGACTGGTGA 639 0.457 MPEMDERVVIQQPLSAIAEAFEELSKRIKERKNNANEIRLDTFCEAASLVSVLFRCLGLAFKFAELEYVAKLHGLLEASKTCPTLPDILNIDVANDTVKTSGSYSRNLRRVRQGLDLVRAIFEQLLSTYDSSLKDVATTAYGQVCAPYHTWAVRTAVYAGMYTLPTREQLLMKLNETEQSAEKKMRRYIAATLPIIEYIDKLYLSRNIKLDW 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1840 212 Coils Coil 18 41 - -
Aed1g1840 212 PANTHER ACD11 HOMOLOG PROTEIN 8 212 - -
Aed1g1840 212 SUPERFAMILY Glycolipid transfer protein, GLTP 31 212 IPR036497 -
Aed1g1840 212 Pfam Glycolipid transfer protein (GLTP) 38 176 IPR014830 GO:0005737|GO:0120009|GO:0120013
Aed1g1840 212 Gene3D Glycolipid transfer protein 7 212 IPR036497 -
Aed1g1840 212 Coils Coil 167 191 - -
Aed1g1840 212 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 8 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1840 Aed-Chr1 15748904 15752090 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1840 10 212 Acyl Lipid Metabolism Gene Families AT4G39670 67.476 7.10e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1840 - - gmx:100818548 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1840 1 15748904 15752090 Aed1g1840 1 15748904 15752090 ECH