Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1797 ATGGCCAGGCCCCTTGAACAAGCAAAATTAAACACAAAAGCCCAACACTCTCGCTGCTGGTCTCCCCATTTGGCATTCGCATTCGCAGATCGAATACGAGTAATTTCACTGAATCTCATCGAAGATGTTTCTCACAAGTATGACCGAGGAGTCAACACCTTTTCTCCCGAAGGCCGATTGTTTCAGGTTGAATATGCAATTGAAGCCATTAAGCTGGGATCAACTGCGATTGGGCTGAAGACGAAAGAGGGTGTTGTCCTTGCAGTTGAAAAGCGCATCACTTCGCCACTGCTGGAGCCAAGTAGTGTTGAGAAAATTATGGAAATTGATGAGCACATAGGCTGCGCAATGAGTGGATTGATTGCTGATGCTCGGACACTTGTTGAGCATGCACGGGTTGAAACTCAGAATCATAGGTTCTCCTATGGTGAGCCAATGACTGTTGAGTCCACAACCCAAGCTCTTTGCGATCTAGCCTTGCGTTTTGGTGAAGGTGATGAAGAATCCATGTCTCGACCATTTGGAGTATCTCTTCTCATTGCTGGCCATGATGAGAATGGACCATGCTTATATTACACTGATCCATCTGGCACATTTTGGCAATGCTATGGAAAAGCTATTGGTTCAGGGTCGGAAGGTGCAGACAGTTCGCTGCAAGAACAATACAATAAGGTCACTCCCAACAACGTCGACATTGCCAAGGTGGCTCCAACATATCATCTTTATACACCCTCTGAGGTGGAAGCTGTGATAAGTCGTCTATGA 765 0.4614 MARPLEQAKLNTKAQHSRCWSPHLAFAFADRIRVISLNLIEDVSHKYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPCLYYTDPSGTFWQCYGKAIGSGSEGADSSLQEQYNKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1797 254 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 41 237 IPR029055 -
Aed1g1797 254 Pfam Proteasome subunit 70 224 IPR001353 GO:0005839|GO:0051603
Aed1g1797 254 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 46 248 IPR029055 -
Aed1g1797 254 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 29 224 - -
Aed1g1797 254 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 223 254 - -
Aed1g1797 254 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 29 224 - -
Aed1g1797 254 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 223 254 - -
Aed1g1797 254 ProSitePatterns Proteasome alpha-type subunits signature. 47 69 IPR000426 GO:0006511|GO:0019773
Aed1g1797 254 ProSiteProfiles Proteasome alpha-type subunit profile. 62 254 IPR023332 -
Aed1g1797 254 CDD proteasome_alpha_type_5 47 235 IPR033812 GO:0019773|GO:0043161
Aed1g1797 254 Pfam Proteasome subunit A N-terminal signature 47 69 IPR000426 GO:0006511|GO:0019773
Aed1g1797 254 SMART Proteasome_A_N_2 47 69 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1797 Aed-Chr1 15437830 15442990 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1797 K02729 - gmx:100799919 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1797 1 15437830 15442990 Aed1g1797 1 15437830 15442990 ECH