Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1777 ATGGGGGTTACAAGTTTTCTAAAAAATTGCACCTTTTTGGTGGCAATTCTTTCTAGTTTTCTCTTGAATTGTGTCATGGCTAGTGTTTACACTGTTGGTGACCAAGAAGAATGGAGCAGCCAAACAAATTACGCTTCATGGGCAGACAGATACAATTTTAGCCGCGGCGATGTTCTTGTTTTCAAGTACGTGAAAGGGCAACATAATGTGTATGAAGTGACAGAAGACACATTCCGATGGTGTAATGCAAGTAGTGGAGTGTTGGCCAAGTACGAGAGTGGAGAAGATCAAGTGCCACTCAATGAGGTCAAGAGATATTGGTTCATTTGCAACATAGCAGGGCACTGCCTTGGGGGCATGAGGTTTGGAATTGAAGTGAAAGATGTTAGTAACAATAATAATAATGTTACTAATTCCACAAATGGTGTATTTCACCCACCTATTCAACCAACTCCCTCGGATAATTCTTGTACCAGTTACCATGTATCTCAAACATGGAGAGTGATTCAGAATTTTATTCTTTTAGGATTGTTATTGTTCAACAATTATTTTTTATAA 558 0.3871 MGVTSFLKNCTFLVAILSSFLLNCVMASVYTVGDQEEWSSQTNYASWADRYNFSRGDVLVFKYVKGQHNVYEVTEDTFRWCNASSGVLAKYESGEDQVPLNEVKRYWFICNIAGHCLGGMRFGIEVKDVSNNNNNVTNSTNGVFHPPIQPTPSDNSCTSYHVSQTWRVIQNFILLGLLLFNNYFL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1777 185 Pfam Plastocyanin-like domain 38 120 IPR003245 GO:0009055
Aed1g1777 185 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Aed1g1777 185 PANTHER BLUE COPPER PROTEIN 10 140 IPR039391 GO:0009055
Aed1g1777 185 SUPERFAMILY Cupredoxins 27 126 IPR008972 -
Aed1g1777 185 Gene3D - 26 132 IPR008972 -
Aed1g1777 185 CDD Phytocyanin 29 126 - -
Aed1g1777 185 PANTHER BLUE COPPER BINDING PROTEIN-LIKE 10 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1777 Aed-Chr1 15252688 15253341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1777 5 130 Miscellaneous Gene Families AT2G31050 37.209 7.82e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1777 - - gmx:100788784 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1777 1 15252688 15253341 Aed1g1777 1 15252688 15253341 ECH