Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1775 ATGGATGAGCAGGAGGTAGTGATTGTGGGAGCTGGAATTGCTGGCCTCGCAACATCCTTGGCACTTCACAGGTTGGGTGTCCGAAGTTTGGTGTTAGAATATTCAGATACATTGAGAGTCACTGGCTTTGCTTTAGCAACATGGACAAACGCATGGAAAGCCTTGGATGCTCTTGGTGTTGGACCCATTCTTCGTCACCAGCATCTCCAGCTAAAAGAGAATGTGACTACATCTTTGATTATGGGGCAACGAACATCAAGCGTGTCTTTGGAAGGCGCACGAAAACATGGAGACTGTGAAGTTCGTTGTGTTAAAAGGCAGTTAATGTTGGAAGCAATTGCTAACGAGCTTCCAAGTGGCACCATCAGGTTCTTGTCAAAGGTATTGATTGGGTGTGATGGAATAAACTCTGTGGTGGCAAAGTGGCTGGGCTTCAAGGAGGCCTCTTCTACGGGAAGATACGTAATAAGGGGTTACAAAAAGATGATGGCCAATCATGGGCTTGAGCCCAAATTCATGCACTACTTTGGGAAAGGCTTTAGATCTGGTCTAATGCCCTGTGATGACAACACTGTTTATTGGTTTTTAACTTGGACTCCCACCACTGAAGAGAAGGAGGTGGCAAAGAACCCATCCAAAATGAAGCAATTAGTGCTGAGCAAGGTTGAGAAAATGCCAAGTGATATTAAAACCTTTATAGAGAAAACAGACCCAAAGGACATATTAGCATCTCCATTGAGATACAGGCATCAGTGGGAGCTGATGTTTGGGAACATTAGCAGAGGCAATGCTTGTGTTGTTGGAGATGCATTTCACCCCATGGCCCCTGATCTAGGGCAAGGTGGGTGTTGTGCCTTGGAGGATGGGATTGTTTTAGCCAAGTATCTAGCTGAGGCTTTCTCCAAAAAAACTGGGGGCAAACATGTTAAGGAGCAATACAAAATAATTGAGGCTAGCCTGAGGAAATATGCAAAAGAGAGACGATGGAGAAACATTGATGTTAGTGTTACATCTTATGTTCTGGGGTTTGTTCTGCAGGGTGATTTTAAATTGGTTGCACATTTTAGGGACAAAGTTTTCCCTCATTTCCTAGCTGAGCTGCTTATGAAGAAGTCAGATTTTGATTGTGGAAAACTTAACTAA 1143 0.4392 MDEQEVVIVGAGIAGLATSLALHRLGVRSLVLEYSDTLRVTGFALATWTNAWKALDALGVGPILRHQHLQLKENVTTSLIMGQRTSSVSLEGARKHGDCEVRCVKRQLMLEAIANELPSGTIRFLSKVLIGCDGINSVVAKWLGFKEASSTGRYVIRGYKKMMANHGLEPKFMHYFGKGFRSGLMPCDDNTVYWFLTWTPTTEEKEVAKNPSKMKQLVLSKVEKMPSDIKTFIEKTDPKDILASPLRYRHQWELMFGNISRGNACVVGDAFHPMAPDLGQGGCCALEDGIVLAKYLAEAFSKKTGGKHVKEQYKIIEASLRKYAKERRWRNIDVSVTSYVLGFVLQGDFKLVAHFRDKVFPHFLAELLMKKSDFDCGKLN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1775 380 Pfam FAD binding domain 123 302 IPR002938 GO:0071949
Aed1g1775 380 Pfam FAD binding domain 4 68 IPR002938 GO:0071949
Aed1g1775 380 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 3 128 IPR044560 -
Aed1g1775 380 SUPERFAMILY FAD/NAD(P)-binding domain 5 366 IPR036188 -
Aed1g1775 380 PANTHER MONOOXYGENASE 2-RELATED 126 380 - -
Aed1g1775 380 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 126 380 IPR044560 -
Aed1g1775 380 PANTHER MONOOXYGENASE 2-RELATED 3 128 - -
Aed1g1775 380 Gene3D - 4 126 IPR036188 -
Aed1g1775 380 Gene3D - 127 358 IPR036188 -
Aed1g1775 380 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 261 276 - -
Aed1g1775 380 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 292 - -
Aed1g1775 380 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1775 Aed-Chr1 15239776 15241377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1775 4 380 Miscellaneous Gene Families AT5G05320 45.792 4.15e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1775 - - gmx:100799862 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1775 1 15239776 15241377 Aed1g1775 1 15239776 15241377 ECH