Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1764 ATGGAGGCAGAGATTGATCACTACGCGGTTCTAGGGTTACCGTCCGGCGAAGAAGGCGCGAAGCTAACAGACAAGGAAATCAACAAGGCCTACAGATGGAAGGCTCTCGAACTGCACCCCGACAAGAGGCCCGACGACCCCAACGCCGCCGTCAACTTCCAACAGCTCCGCACCTCATACGACATCCTTAGGGACGACAAGGCCCGCAAGTTGTTCGACGACCTCTTGCGCGTCAAGCGCGACCGCGAGCTCCGCAACTCGCAGCGCGACGGTAAGCGCCGCAAGATGGTCTCCGATCTCGAGCGTCGTGAGCGCGACGCCAACGCCCCCGACCCCGCTGCCAAGGACCGCGAAGAGGAGGCCAGGATTGCGCGCCAGCTCAAGCAGGAGATTGAGAGGATTCGTGCTATGCACGGGAAGAAGGAGGCTCATCCGCCACCGCCGCCGGAGAAGGAGAGTGGCGGTGGGGGAGGTGGAGTAGATCAAGTGAAGGTTCTGAAGGTTGCTGCTACCGGGAGTGTGATTGGTCATCTTGCTAATCCGTTGCTTGTTTTGCCTCTTAAACCAGCCACTGTGGCTGATTCTTTGAGTGTTCCGAAATCTGCTGAAACAACCAGGATGAGTAATCTGGTTGGTGCTGGGTATCAAGCTTTTGAGGATTCGGTTCTGAAGAAACTACTGCAAAAGGAGTCTACCACCTCTGGTGATATAATAAGGAATTTTCCTTTTGATGAAAACCATAAACTGAAAAGTGAATCAGTTGTGTGGCTTTAA 774 0.5465 MEAEIDHYAVLGLPSGEEGAKLTDKEINKAYRWKALELHPDKRPDDPNAAVNFQQLRTSYDILRDDKARKLFDDLLRVKRDRELRNSQRDGKRRKMVSDLERRERDANAPDPAAKDREEEARIARQLKQEIERIRAMHGKKEAHPPPPPEKESGGGGGGVDQVKVLKVAATGSVIGHLANPLLVLPLKPATVADSLSVPKSAETTRMSNLVGAGYQAFEDSVLKKLLQKESTTSGDIIRNFPFDENHKLKSESVVWL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1764 257 PANTHER DNAJ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 169 - -
Aed1g1764 257 CDD DnaJ 6 65 IPR001623 -
Aed1g1764 257 PANTHER DNAJ DOMAIN CONTAINING PROTEIN, EXPRESSED 168 230 - -
Aed1g1764 257 Pfam DnaJ domain 6 73 IPR001623 -
Aed1g1764 257 MobiDBLite consensus disorder prediction 85 121 - -
Aed1g1764 257 PANTHER DNAJ DOMAIN CONTAINING PROTEIN, EXPRESSED 168 230 - -
Aed1g1764 257 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Aed1g1764 257 SUPERFAMILY Chaperone J-domain 3 77 IPR036869 -
Aed1g1764 257 PANTHER DNAJ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 169 - -
Aed1g1764 257 Gene3D DnaJ domain 1 102 IPR036869 -
Aed1g1764 257 MobiDBLite consensus disorder prediction 138 159 - -
Aed1g1764 257 ProSiteProfiles dnaJ domain profile. 6 76 IPR001623 -
Aed1g1764 257 SMART dnaj_3 5 68 IPR001623 -
Aed1g1764 257 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1764 Aed-Chr1 15173901 15177004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1764 5 122 Miscellaneous Gene Families AT1G16680 30.508 2.78e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1764 K09537 - gmx:100792307 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1764 1 15173901 15177004 Aed1g1764 1 15173901 15177004 ECH