Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1759 ATGGAGGGATTAGGAGGACTGGGACACCTTTTAGTGACAATGTTTGTGACGGGATTAGGCGGTGTCATAACTCTTCCAGCAATCACCGACGTAACCATGGCTGCACTTTGCCCTGCTCAAGATCAGTGCTCCCTTGCCATTTACCTCTCTGGTTTCCAACAAGCTATGGCTGGAGTGGGGTCAGTGGTGATGACACCATTAATAGGAAACTTGTCGGACCGATATGGCAGGAAAGCGTTACTAACACTTCCTCTCACACTCTCTGTCATTCCTCAAGTGATATTGGCATATAGCAGGGATACCCAATTCTTCTACGCCTACTATGTTGTGAAAACTCTAGCTGCCATGGCAGGCGAAGGGTCCTTCCACTGCCTCGCTCTTGCATATGTGGCAGACAAGGTTCCTGATGGGAAACGAACATCGGCATTCGGAATACTTGCTGGTGTTGGATCAGCGTCATTTGTTGGTGGAACATTACTCGCTCGTTTCCTATCCACTGCTTTGACATTCCAGGTTGCTTCAGTCTTGTCAATGATTGCATTGCTCTACATGAGAATCTTCCTTAAGGATAGTGTACCTGCTGCTTCCATCAGACACCCACTATTAAAACCATGTGCTGAGGCTGATCATGATTCATCAACAGGAACATTTAAGAAACTTCCCTCCTTTGGGGATTTCATTTGTTTGCTCAAGTGTAGTCCCACATTCTCCCAAGCGGCCATTGTTTCGTTCTTCAATAGTCTTGCAGATGGTGGCATGATGGCCGTATTGCTTTATTATTTAAAGGCACGTTTTCAATTCAACAAGAACCAGTTTGCTGATTTGTTTATGATTACTGGGATTGGAGCCACTGTTGCACAACTACTTTTCATGCCCATTTTAGTGCCTGTAATAGGAGAGGAGAAGCTGCTCTCCACAGGGCTCTTAATTAGCTGCATAAATGTCATTGTCTACAGCATAGCATGGTCAGGATGGGTCCCTTATGCTCTAGCAGGTTGCTCTGTGTTTGCAGTTTTTGTGCGCCCAAGTTTATGCAGCATTGCATCGAAGCAAGTTGGACCTAATGAACAGGGAATGGTTCAAGGATGTCTTTCAGCAATTAGTTCCTTCGCCAACATCATTGCTCCATTAATTTTCAGTCCACTGACAGCCTTATTCCTGTCAGAAGAAGCACCGTTTTATTATCCTGGCTTCAGTCTAATGTGCCTTGGACTAGCACTGATGGTAGCATTTTTTCAGAGTCTAATGATCCGTGCTGCTCCTCCTATTGCGGGTGGCAAAATTAGCAGTAACCACTGCACGGATACTTTGGTCTGA 1317 0.4548 MEGLGGLGHLLVTMFVTGLGGVITLPAITDVTMAALCPAQDQCSLAIYLSGFQQAMAGVGSVVMTPLIGNLSDRYGRKALLTLPLTLSVIPQVILAYSRDTQFFYAYYVVKTLAAMAGEGSFHCLALAYVADKVPDGKRTSAFGILAGVGSASFVGGTLLARFLSTALTFQVASVLSMIALLYMRIFLKDSVPAASIRHPLLKPCAEADHDSSTGTFKKLPSFGDFICLLKCSPTFSQAAIVSFFNSLADGGMMAVLLYYLKARFQFNKNQFADLFMITGIGATVAQLLFMPILVPVIGEEKLLSTGLLISCINVIVYSIAWSGWVPYALAGCSVFAVFVRPSLCSIASKQVGPNEQGMVQGCLSAISSFANIIAPLIFSPLTALFLSEEAPFYYPGFSLMCLGLALMVAFFQSLMIRAAPPIAGGKISSNHCTDTLV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1759 438 CDD MFS_SLC46_TetA_like 12 416 - -
Aed1g1759 438 Gene3D MFS general substrate transporter like domains 7 412 IPR036259 -
Aed1g1759 438 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 5 423 - -
Aed1g1759 438 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 5 423 - -
Aed1g1759 438 PRINTS Tetracycline resistance protein signature 50 69 IPR001958 GO:0022857
Aed1g1759 438 PRINTS Tetracycline resistance protein signature 360 383 IPR001958 GO:0022857
Aed1g1759 438 PRINTS Tetracycline resistance protein signature 143 165 IPR001958 GO:0022857
Aed1g1759 438 ProSiteProfiles Major facilitator superfamily (MFS) profile. 13 422 IPR020846 GO:0022857
Aed1g1759 438 SUPERFAMILY MFS general substrate transporter 12 412 IPR036259 -
Aed1g1759 438 Pfam Major Facilitator Superfamily 11 376 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1759 Aed-Chr1 15136293 15141441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1759 2 421 Organic Solute Cotransporters AT2G16990 45.662 1.24e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1759 - - gmx:100803054 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1759 1 15136293 15141441 Aed1g1759 1 15136293 15141441 ECH