Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1757 ATGGAGACGACGACGCTAACGCTAACGAAACAAGGGCAGCGATTCCTGACGAAGCTAACGACCTCCTCCGCCACCGCTGACAAGCTGATTCGAAGATTCGTATTAGGGTCACCCAAGTCCGCTGTTCTCAGCACTCTCTCCCATCTCCTGTCTCCCTCCACCTCCTACCCTCACCTAGCCCTCCCCCTGTACACAAGAATGAGCGAAGCCCCATGGTTCAGTTGGAACCCCACCACCGTCGCCGAACTCGCCGCCCTCCTCCACAAACTGGGCCACCATGCCCAATCCGAGGCCCTCATTTCCGAGGCCACTTCCCGGCTACAATCTCGCAAACGCGACCTGGTTCTTTTCTACGGCAAACTCATCCACTCCCACTCCAAACGCAACTCCCAAACCGGCTTTGACGCTGCTTATCTTTACCTCCACAACCTTCTCCGCACTTCCTCTTCTCTTCACGTCAAACGCAGGGCCTACGAGTACATCGTCAGTGCCCTATGTGCCATGGATAGACCCCGTGAGGCCGAGGATATTGGGCCTGGCCTTGGGCTTCAACCTTCGGGCTTCGAGTTCAAGTCAATTGTGTACGGATACGGGAGGTTGGGGTTGTTTGACGATATGAATAGAGTGTTGGGTGAGATGGAGAAGAGTGGGTTAGTGGTTGACACGGTTTGTTACAACATGGTTCTTGCCACGTACGGGATTCACGGGGACCACGTGGAAATGGCGTCGTGGCTGAGGAGGATGAGGGATGAAAATGTTCCGTTTTCCGTTAGGACTTATAATTCCGTCTCCAATTGTTGCCCTACCATTACGAGAATGACGGGGGAGTTGAGTGAATTGGCGTTGTCGATTGAGGACTTGAATGAGCATTTGGAAGGAGGGGAAGGGATGGTGGTGAGGGAGTTGTTGCGGTGTCGTGGGATATTGGAGGAGGTGATGGTGTGGGATTCTGTGGAGGTGAAGTTGGATTTGCATGGATTTCACTTGGCTTCGGCCTATTTGATTGTGTTGCTTTGGTTGGAAGAGATGAGAACGAGGTTTAATGATGGACTTATTCCTGCGGAAGTTACGGTGGTTTGTGGGTTGGGAAAGCATAGCAGTGTCAGAGGAGAGTCGCCGGTGAGAGTGTTGGTTCAGAAGATGATGCTCAAAATGGCTAGTCCGTTGAAGGTTGATAGGAACAACAATGGCTGCTTCATTGCCAAAGGTAAAGCTCTCCATAACTGGTTGTGTAATGCCTAA 1242 0.5209 METTTLTLTKQGQRFLTKLTTSSATADKLIRRFVLGSPKSAVLSTLSHLLSPSTSYPHLALPLYTRMSEAPWFSWNPTTVAELAALLHKLGHHAQSEALISEATSRLQSRKRDLVLFYGKLIHSHSKRNSQTGFDAAYLYLHNLLRTSSSLHVKRRAYEYIVSALCAMDRPREAEDIGPGLGLQPSGFEFKSIVYGYGRLGLFDDMNRVLGEMEKSGLVVDTVCYNMVLATYGIHGDHVEMASWLRRMRDENVPFSVRTYNSVSNCCPTITRMTGELSELALSIEDLNEHLEGGEGMVVRELLRCRGILEEVMVWDSVEVKLDLHGFHLASAYLIVLLWLEEMRTRFNDGLIPAEVTVVCGLGKHSSVRGESPVRVLVQKMMLKMASPLKVDRNNNGCFIAKGKALHNWLCNA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1757 413 PANTHER ATPASE EXPRESSION PROTEIN 3 3 412 - -
Aed1g1757 413 TIGRFAM PPR: pentatricopeptide repeat domain 192 222 IPR002885 -
Aed1g1757 413 TIGRFAM PPR: pentatricopeptide repeat domain 223 254 IPR002885 -
Aed1g1757 413 SMART SMR_2 319 404 IPR002625 -
Aed1g1757 413 SUPERFAMILY SMR domain-like 320 402 IPR036063 -
Aed1g1757 413 ProSiteProfiles Smr domain profile. 322 404 IPR002625 -
Aed1g1757 413 Gene3D Tetratricopeptide repeat domain 38 305 IPR011990 GO:0005515
Aed1g1757 413 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 186 220 IPR002885 -
Aed1g1757 413 Pfam Pentatricopeptide repeat domain 208 266 IPR002885 -
Aed1g1757 413 PANTHER OS02G0120000 PROTEIN 3 412 - -
Aed1g1757 413 Gene3D - 320 402 IPR036063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1757 158 265 Glycosyltransferase AT1G05670 27.928 6.39e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1757 - - gmx:100805233 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1757 1 15118462 15119773 Aed1g1757 1 15118462 15119773 ECH