Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1750 ATGGGATCGAAGAAGAATGAAGAAATGGGTAACAACGGTGGCGAGGAAGCGGCGAGTCTGGATCAGCTCCCTTCCGCTCTGGTGGCGAGTATCATGACGAAGCTCGACATCGCTTCCATATGCTCCTTGGCTTCCACCTCCTCCGCCTTCCGCTCCTGCGCCCGACACATCCTCTCCTTCCTCCCCTCTTTCCACCTCCTCGACATTGCTCCTTCAGGGGAGTTGCTGGGACCGTTGCTGCCTCCCAATCCCTACATCACCAGCCTCAAGGTCGATTGCGGCCACCTCGACGATTCCGCAATCGGATTCTTGCTCAAACCCTCCTTGCACGATCTCTGTCTCCACAATTGCGCCGATTTCAGTGGTAGACTCTTGTCCGAGATCGGCACCCGATGCAACCATCTCAGGTCTCTCTACTTGGGCTCCGTCGCTGAGAAGAGGGGCAGGGCAATTCACATCACTGATCTCCAGGACTTGCTCAGCGGCTGCTCCCACTTGGAAGCATTGATTCTGATGTTTGACGTCTCTCTCTTTCTACGGCACAACTTTGCTCGAGTATGGGCTTCTGCCTCACAGAAACTCACTTCTCTTGAGATTGGCTACATTTCTTCAGTTACAGTGACTGAGCTGCTTAGCCCAAATTTGGGATCCCATCTGCCCTCAAATCCTGCTCAACCATCCATACTTCCAAGCATTCAGAAACTATGTCTTAATGTAGACTACATAACTGATGCTATGGTTGGTACAATTTCCAAAGGTCTCATCTTTTTGACCCATTTGGATCTTCAAGATGCACCACTGATTGAACCAAGAATTACGTTTGACCTAACCAATGCTGGTCTTCAACAAATTAATCAACTTGGGAGATTGAAACATCTTTCATTGGTCCGGAGCCAAGAGTTCCTAATTACCTACTTTCGAAGAGTGAATGATCTGGGATTACTTCTAATGGCTGACAAATGTGCAAACATGGAGAGCATATGCCTTGGTGGCTTTTGTCGTGTCACAGACACCGGTTTCAAAACTATCATGCATTCTTGCACTCGCTTATACAAGCTTAAGGTCACTCATGGGACTCATTTAACTGATCTTGTTTTTCATGATATTTCCGCGACATCCCTTACTTTAACACATGTTAGCTTAAGACGGTGCAACCTGTTAACCAACCATGCTGTTTTGAGTTTGGCATCAAACAAGGAACTTAAGGTTCTTGACTTGAGAGATTGCAGAAGCCTTGGGGATGAAGCTCTCCAAGCCGTTGGCACTCTTCCAAGACTGAAAATTTTACTATTAGATGGCTCTGATATAACAGATGCAGGACTTTTGTACTTAAGACCATCTGTTATTAGCTCACTGTATGCATTGTCGCTTCGAGGGTGCAAGAGACTTACAGATAAATGCATCACAGCTCTATTTAATGGCTGCTGTGTGATGGAATTACGAGAACTGGATCTATCCAATCTTCCTAACCTCTCAGATAATGGAGTTCTGCTGCTGGCAAAAAGTCGGATCCCCTTCTTTGAACTCCGTATGCGACAGTGCCCTCTAATCGGTGATACTTCAGTCATGGCATTAGCTTCAATGCTGATTGATGAGGCCAAACATGGAAGCAGTTTGCGTTTATTAGATCTTTTTAACTGTGGTGGCATTACACCACTTGCATTCCGCTGGTTGAAGAAACCATATTTTCCAAGGCTCAAATGGTTGGGAGTGACAGGAAATGTTAATAGAGACATTGTAGATGCTTTAGCCAGAAGCAGACCATTCTTACATGTGGCATGCCATGGTGAGGAGCTTGGGGCTGATCCCTATGACACTTCAGATGGGTTATATACACATGATTATGATGACGTGGATGAATTTGAGCAGTGGCTTCTTGAAGCAGATATTGATAGTGACTATGAAGAGATGGGCGATGCTGAAAATAATGATGAAATGGTTGTGTGA 1947 0.4592 MGSKKNEEMGNNGGEEAASLDQLPSALVASIMTKLDIASICSLASTSSAFRSCARHILSFLPSFHLLDIAPSGELLGPLLPPNPYITSLKVDCGHLDDSAIGFLLKPSLHDLCLHNCADFSGRLLSEIGTRCNHLRSLYLGSVAEKRGRAIHITDLQDLLSGCSHLEALILMFDVSLFLRHNFARVWASASQKLTSLEIGYISSVTVTELLSPNLGSHLPSNPAQPSILPSIQKLCLNVDYITDAMVGTISKGLIFLTHLDLQDAPLIEPRITFDLTNAGLQQINQLGRLKHLSLVRSQEFLITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTIMHSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKELKVLDLRDCRSLGDEALQAVGTLPRLKILLLDGSDITDAGLLYLRPSVISSLYALSLRGCKRLTDKCITALFNGCCVMELRELDLSNLPNLSDNGVLLLAKSRIPFFELRMRQCPLIGDTSVMALASMLIDEAKHGSSLRLLDLFNCGGITPLAFRWLKKPYFPRLKWLGVTGNVNRDIVDALARSRPFLHVACHGEELGADPYDTSDGLYTHDYDDVDEFEQWLLEADIDSDYEEMGDAENNDEMVV 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1750 648 Gene3D Ribonuclease Inhibitor 418 611 IPR032675 -
Aed1g1750 648 Gene3D Ribonuclease Inhibitor 16 417 IPR032675 -
Aed1g1750 648 Pfam Leucine Rich repeat 398 419 IPR001611 GO:0005515
Aed1g1750 648 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 23 571 - -
Aed1g1750 648 PANTHER UNCHARACTERIZED 23 571 - -
Aed1g1750 648 SUPERFAMILY RNI-like 61 297 - -
Aed1g1750 648 Pfam F-box domain 20 57 IPR001810 GO:0005515
Aed1g1750 648 SUPERFAMILY RNI-like 309 575 - -
Aed1g1750 648 SUPERFAMILY F-box domain 12 56 IPR036047 GO:0005515
Aed1g1750 648 SMART LRR_CC_2 536 561 IPR006553 -
Aed1g1750 648 SMART LRR_CC_2 399 423 IPR006553 -
Aed1g1750 648 SMART LRR_CC_2 477 502 IPR006553 -
Aed1g1750 648 SMART LRR_CC_2 508 528 IPR006553 -
Aed1g1750 648 SMART LRR_CC_2 373 398 IPR006553 -
Aed1g1750 648 SMART LRR_CC_2 321 346 IPR006553 -
Aed1g1750 648 SMART LRR_CC_2 106 131 IPR006553 -
Aed1g1750 648 SMART LRR_CC_2 449 474 IPR006553 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1750 - - gmx:100789353 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1750 1 15069498 15072298 Aed1g1750 1 15069498 15072298 ECH