Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1579 ATGGGTGGTTCGAGATTCCCATCTCATCAGCTCAGCAATGGCCTGTATGTATCAGGTCGGCCTGAACAGCCGAAAGAAAAAACTCCAACAATGAGCTCAGTTGCGATGCCTTACACTGGTGGAGACATCAAGAAATCAGGAGAATTAGGGAAAATGTTTGATATCTCCATGGCCATGGCCATGCCCATGCCCATGGATGGTTCTAATTCTAAATCTAGAAAATCTGGTCAGCTAAACAACGCTCCTTCACGGACTGGTTCCTTTGCTTCACATTCTGGTCCTATTTTGCCAAATACTGCTGCACCTCGTTCTATTTATTATACCACCACTTCTTCTGTCTCAATGAAAAAGACCAACTCCGGTCCACTCAATAAACACGGGGAGCCTGTAAAGAAGTCATCTGGGTCTCAATCTTCTGGAGTCACACGCCAAAACTCCGGTCCCATTCCACCTGTTCTTCCTACAACTGGTCTTATTACATCTGGTCCTCTAAATTCATCTGGGCCTCCAAGGAAGGTATCTGGTCCATTAGAGTTTTCAGGATCAATCAAATCACTTAGTTCTGTAACTCACAATCCCGCCATTACCACTCTTAGCCTAGATGATGAATATTCCTTTAGGAGGAACTTCCCCAAACCTATATTGTGGTCTGTAATTCTGATTTTCGTTATGGGATTCATTGCTGGTTCTTTTATTCTTGGAGCTGTCCACAATGCCATTCTCCTTGTTGTTGTACTAGTTCTTTTTGGTGCTGTTGCCGCATTGTTCACTTGGAACAGTTGTTGTGGGAGGACAGCCATTGTTGCTTTCATTTCTCGTTATCCTGATGCTGAGCTTAGAACTGCCAAGAATGGGCAATTTGTGAAGGTTTCTGGGGTGGTTACCTGTGGTAATGTTCCACTGGAGTCATCCTTTCAAAAAGTTTCTAGATGTGTCTGTACTTCTACAAGCTTGTTGGAATATCGAGGGTGGGATTCAAAAGCAGCCAACCCGAAGCATCGCCGATTTACATGGGGACTCAGAGCAGCTGAGAGGCATGTGGTGGACTTCTACATTTCTGATTTCCAATCTGGATTGAGAGCATTGGTTAAAACAGGCTATGGTGCAAGGGTGACTCCTTATGTTGATGATTCTATTGTAATTGATGTTAACGCTGACAATAAAGACATGTCCCCAGAGTTTCTTCGATGGTTGCAAGAGAGAAATCTTTCAAGTGATGATCGAATGATGCAATTAAAAGAAGGGTACATCAAAGAAGGTAGCACAGTCAGCGTAATGGGAGTTGTTCAAAGAAACGACAATGTACTTATGATTGTCCCTCCTCCTGAGCCTTTGACTACTGGATGCCAATGGGCCAAATGTATGTTTCCAGCTAGCCTTGAGGGTATTATTTTGAGATCTGAGGATACATCAAAGATTGATGTCATTCCAGTGTAA 1437 0.4342 MGGSRFPSHQLSNGLYVSGRPEQPKEKTPTMSSVAMPYTGGDIKKSGELGKMFDISMAMAMPMPMDGSNSKSRKSGQLNNAPSRTGSFASHSGPILPNTAAPRSIYYTTTSSVSMKKTNSGPLNKHGEPVKKSSGSQSSGVTRQNSGPIPPVLPTTGLITSGPLNSSGPPRKVSGPLEFSGSIKSLSSVTHNPAITTLSLDDEYSFRRNFPKPILWSVILIFVMGFIAGSFILGAVHNAILLVVVLVLFGAVAALFTWNSCCGRTAIVAFISRYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFQKVSRCVCTSTSLLEYRGWDSKAANPKHRRFTWGLRAAERHVVDFYISDFQSGLRALVKTGYGARVTPYVDDSIVIDVNADNKDMSPEFLRWLQERNLSSDDRMMQLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCMFPASLEGIILRSEDTSKIDVIPV 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1579 478 MobiDBLite consensus disorder prediction 112 171 - -
Aed1g1579 478 MobiDBLite consensus disorder prediction 68 94 - -
Aed1g1579 478 MobiDBLite consensus disorder prediction 1 47 - -
Aed1g1579 478 MobiDBLite consensus disorder prediction 130 151 - -
Aed1g1579 478 MobiDBLite consensus disorder prediction 62 100 - -
Aed1g1579 478 MobiDBLite consensus disorder prediction 1 17 - -
Aed1g1579 478 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19 PROTEIN 3 478 - -
Aed1g1579 478 PANTHER OSJNBA0035M09.9 PROTEIN 3 478 IPR040339 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1579 Aed-Chr1 13985455 13988909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1579 - - gmx:100807593 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1579 1 13985455 13988909 Aed2g0018 2 214762 219006 PCT