Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1519 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTGTTCGAAGAGCTTCCCCCTTCCCCGCCAGTATCCAAGAGGCTCCGTTGTTCATCCTCCCCAATTCGCCTCTCTCTCCCTTCTCTCATCGACAACCTTCGCCCTCTCTTCCCTCATATGGATGACCAGGTCCTCGAGAGAGCGCTCCAAGAATGTGGCAATGACCTAGATGCTGCCATCAAGAGCCTCCACGGCCTCTGTTTGGGATCTGCTGATGATAATTCTCAAACTGCTCCACTACCTGACCACCCTAACGTCGTCCATACAGGTGCGTTGGAAGAGAATGGTGATGCTTCTGCTTCTGGAGATCAGCCAGCGGCTTCTGGCAATTTTCCCGCTGATGGAGCAGAATGGATTGATTTGTTTGTTAGAGAGATGACGTGTGCTACTAGTGTTGATGATGCCAGAGCCCGTGCTGCTAGATTGCTGGAGGTTCTAGAGAAATCAATCACTGCACATGCCAGTTCCGGGGCAACAGCTGCTCTTCAAAGGGTGAATAACTATGCTTTGCGAATGCATTTGAATCAGGCACAGCAGTACAACCCTTTTCCTGGGCGTTTTCCTCCTGATGCCTTCTAA 612 0.5114 MSAAVCGSKRSLFEELPPSPPVSKRLRCSSSPIRLSLPSLIDNLRPLFPHMDDQVLERALQECGNDLDAAIKSLHGLCLGSADDNSQTAPLPDHPNVVHTGALEENGDASASGDQPAASGNFPADGAEWIDLFVREMTCATSVDDARARAARLLEVLEKSITAHASSGATAALQRVNNYALRMHLNQAQQYNPFPGRFPPDAF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1519 203 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 176 203 - -
Aed1g1519 203 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 176 203 - -
Aed1g1519 203 Pfam CUE domain 39 74 IPR003892 GO:0043130
Aed1g1519 203 SUPERFAMILY UBA-like 38 81 IPR009060 GO:0005515
Aed1g1519 203 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Aed1g1519 203 MobiDBLite consensus disorder prediction 86 120 - -
Aed1g1519 203 CDD CUE 39 74 - -
Aed1g1519 203 Gene3D - 38 80 - -
Aed1g1519 203 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 177 - -
Aed1g1519 203 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1519 Aed-Chr1 13618216 13621802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1519 - - gmx:100815998 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1519 1 13618216 13621802 Aed2g0116 2 847486 851053 PCT