Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1513 ATGCTTGGTTTGGGTGCGGACCTCTTGTGGGCCGACATGAACCGTTTACTTGCCTTTCTTTTCCACCAGGGGGTCTTGGATCACCATTTTTTGCAGCTTCAACACCTTCAAGATGAAGCCTCCCCTAACTTCGTTTCTCAGGTCGTCAACATTTACTTCCACCACTCCGACAAGCTACTCACCAAACTCAGAGCATTGCTAATGGAAAGGGAGTACAAGAAAATGGGAATCCATTTGAATCAGTTAATGGGTAGCAGCTCAAGTATTGGTGCCAAGAGACTCACTAACGTCTGCCTTGCCTTTCGCGCTGCTACTCACCAGACCAACCGTGCTGGATGCTTGCGCGCGTTGGAGATGCTGGAGCATGAATATTGCTATCTCAAGAACAAATTGCAGGAACTCTTCCAGATTGAGCAACAACGTGATTTAGTAGCAGGAGTGAGATACCCTGTGCAGAATCAATAA 465 0.4731 MLGLGADLLWADMNRLLAFLFHQGVLDHHFLQLQHLQDEASPNFVSQVVNIYFHHSDKLLTKLRALLMEREYKKMGIHLNQLMGSSSSIGAKRLTNVCLAFRAATHQTNRAGCLRALEMLEHEYCYLKNKLQELFQIEQQRDLVAGVRYPVQNQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1513 154 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 149 - -
Aed1g1513 154 PANTHER - 1 149 IPR045871 GO:0000160|GO:0009927|GO:0043424
Aed1g1513 154 Gene3D HPT domain 4 152 IPR036641 GO:0000160
Aed1g1513 154 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 134 IPR008207 GO:0000160
Aed1g1513 154 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 140 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1513 Aed-Chr1 13592811 13593407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1513 K14490 - gmx:100814937 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1513 1 13592811 13593407 Aed1g1513 1 13592811 13593407 ECH
Aed1g1513 1 13592811 13593407 Aed2g0121 2 879212 879775 PCT