Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1511 ATGATGTTCTCTTTCTTTTTTCTTTGGCTTCTGCTCTTCTCTCCATTATTTTCTCATGTTATAGGGGATAAAGCATTTAGAGGAACATATGGAGTAAACTATGGGAGGATAGCTGACAACTTGCCTCCCCCAGAAAGCGTGGTTACCCTACTGAAAGCAGCGAAGATCAAGAACATTAGGATATACGATGTTGATCATCAAATCCTCCGAGCCTTCAAAGGGTCTGGCATTGAAATCGTGGTTTGTCTTGGAAATGAATTTCTCGAGGACATGAGTATAGGGGAGTCTAGAGCCATGAGTTGGGTCAAAGAAAACGTTCAGTCATTTCTTCCAGGGACCAAAATTCGCGGAATTGCTGTGGGAAATGAAATCTTGAGTGGCACGGATATGGAACTCTGGCAAGTTTTGCTCCCTGCAGCAAAGAATGTTTATAATGCCCTTAGCAAGCTTGGTCTAGCAAAAGATGTTGAGCCTCTCTTACAATTCTTCTCACAAATTGGCACTCCTTTTTTCATTAATGCATATCCCTTCCTTGCCTATAAGAATGATCCACAACACATTGACCTTAACTATGCCCTCTTCCAAAAGAATCCTGGGATTTATGATGCAAAGACAAAGCTGCATTATAGTAACATGTTTGATGCTCAGGTTGATGCAGCTTATGCTGCCTTGGAGAAGCTTGGGTTTGACAAGATGGATGTTATTGTTTCTGAGACTGGTTGGGCTTCTCATGGGGATGATAATGAAGCCGGTGCAACTATTCAAAATGCAAGGACCTATAATGGTAATTTGCGCAAGCGGTTACTCAAGAAGAAAGGGACCCCTTATAGGCCAAAAAAACTGGTCAAGGCTTATATCTTTGCTTTGTTTAATGAAAATCTGAAGCCCGGCCCAACCTCCGAGAGAAACTTTGGATTGTTTAAGGCTGATGGAAGCATTGCATATGATATTGGCTTCACTGGACTTGTACCTTCTTCAGCAACTTCTTCATATTTCCTACTTTCCTTCAAGGGTATTGGATCCTCCTTCATGATGGCTTGTACAAGTTTTGCTGCTTTTCTTTTTGTAGCATTGTAA 1077 0.415 MMFSFFFLWLLLFSPLFSHVIGDKAFRGTYGVNYGRIADNLPPPESVVTLLKAAKIKNIRIYDVDHQILRAFKGSGIEIVVCLGNEFLEDMSIGESRAMSWVKENVQSFLPGTKIRGIAVGNEILSGTDMELWQVLLPAAKNVYNALSKLGLAKDVEPLLQFFSQIGTPFFINAYPFLAYKNDPQHIDLNYALFQKNPGIYDAKTKLHYSNMFDAQVDAAYAALEKLGFDKMDVIVSETGWASHGDDNEAGATIQNARTYNGNLRKRLLKKKGTPYRPKKLVKAYIFALFNENLKPGPTSERNFGLFKADGSIAYDIGFTGLVPSSATSSYFLLSFKGIGSSFMMACTSFAAFLFVAL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1511 358 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 7 157 - -
Aed1g1511 358 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 156 345 - -
Aed1g1511 358 Pfam Glycosyl hydrolases family 17 156 319 IPR000490 GO:0004553|GO:0005975
Aed1g1511 358 Gene3D Glycosidases 156 322 - -
Aed1g1511 358 Gene3D Glycosidases 29 155 - -
Aed1g1511 358 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 157 IPR044965 GO:0004553|GO:0005975
Aed1g1511 358 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 156 345 IPR044965 GO:0004553|GO:0005975
Aed1g1511 358 SUPERFAMILY (Trans)glycosidases 30 318 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1511 Aed-Chr1 13583351 13584677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1511 25 332 Glycoside Hydrolase AT3G15800 66.077 3.56e-159 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1511 - - gmx:100815468 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1511 1 13583351 13584677 Aed1g1511 1 13583351 13584677 ECH
Aed1g1511 1 13583351 13584677 Aed2g0126 2 898186 899786 PCT