Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1452 ATGAGAATCTCAAAATCTTCCTTGTACAGTACTCTTCTCCTTCTGCATGAGCATCGAAGCTATGTCGTTTTATCGCGGCGTTGTGTTATGACATGCGCAGTGAGTGCGGTGGTGTTCTTAACGAGCATGTACATTTTGTGGCCATCAGATCCTGTTATGAAGATCGTGGGGCTGAAACTGAGGCGCATCAAGGTGCACCCTGTGCCGCCCATCACCGTAGATATCTCGATGGTCCTGACGATGAGGGTGCGCAACGCTGACGTGTACTTCATGGACTTCGGAGCGGTTAACGTGGAAGTCGCCTACAGGGGGAAGATGCTGGGGCACGTGAAGTCGAGGCGCGTGCACGTGAGGGCCAGGGGGTCTTCCTACGTGGATGCTGACGTGGACTTTGCCGGGATCAGTGTGCTACCTGAGCTGGTGTTGCTGCTGGAAGACCTGGCCAAAGGTGTCGTACCCTTTGATACCATTAGCCACTCCAGGGGCCAATTGGGTCTTCTCTTCTTTCACTTCCCCATCAAGGCAAAACTATCGTGTGAGGTTTTGGTGAGTATAATAAACCAGACCATTGTTCGTCAACATTGTCTCCACGAGTGA 597 0.5209 MRISKSSLYSTLLLLHEHRSYVVLSRRCVMTCAVSAVVFLTSMYILWPSDPVMKIVGLKLRRIKVHPVPPITVDISMVLTMRVRNADVYFMDFGAVNVEVAYRGKMLGHVKSRRVHVRARGSSYVDADVDFAGISVLPELVLLLEDLAKGVVPFDTISHSRGQLGLLFFHFPIKAKLSCEVLVSIINQTIVRQHCLHE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1452 198 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 197 - -
Aed1g1452 198 Pfam Late embryogenesis abundant protein 80 177 IPR004864 -
Aed1g1452 198 PANTHER EXPRESSED PROTEIN 18 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1452 Aed-Chr1 13196684 13198470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1452 - - gmx:100792375 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1452 1 13196684 13198470 Aed2g0181 2 1214545 1215567 PCT