Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1412 ATGGCACCACCCCATGGAGAGTCTTTGGCTATAAGCTCATTCTCTTCTAGGAGCAACAACATTCAAAGAACAAAATCAGACATCACGTTTGAGCTAACAAAGGAAGGGATTGATGAATTGGCGGCGCTTCCAGCAATAAGTGAGGTTGTGGATGCCAAGTGTGAGTGCTGTGGGATGAGTGAGGAGTGCACGCCGGAGTACATAGAGCGCGTGCGTGACAAGTTCTTGGGGAAGTGGGTGTGTGGTTTGTGTGCCGAGGCAGTGAAGGAAGAGTTGGAGAAAAACGGTGGGAAGAAAGAAGAGGCGTTGAGTTCACACATGAATGCTTGTGTTAGGTTCAACAAATATGGAAGAGCTTTCCCAGTTCTGTTCCAAGCTGAGGCCATGAAAGAGATGCTAAAAAAGAATAACAAAATGGAAGGGCGAAGGACTAAGTCCTTCAATCCAAGGGACAAAAACAATAAAGGAGGAGGGATTATTGCAAGGTCTTCTAGTTGCATTCCAGCAATTAATCAATTCCTTCCATAA 528 0.4545 MAPPHGESLAISSFSSRSNNIQRTKSDITFELTKEGIDELAALPAISEVVDAKCECCGMSEECTPEYIERVRDKFLGKWVCGLCAEAVKEELEKNGGKKEEALSSHMNACVRFNKYGRAFPVLFQAEAMKEMLKKNNKMEGRRTKSFNPRDKNNKGGGIIARSSSCIPAINQFLP 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1412 175 MobiDBLite consensus disorder prediction 138 158 - -
Aed1g1412 175 Pfam Protein of unknown function (DUF1677) 49 135 IPR012876 -
Aed1g1412 175 PANTHER CASP-LIKE PROTEIN (DUF1677) 18 171 - -
Aed1g1412 175 PANTHER OS01G0745000 PROTEIN 18 171 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1412 Aed-Chr1 12976320 12976847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1412 - - gmx:100785884 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1412 1 12976320 12976847 Aed1g1412 1 12976320 12976847 ECH
Aed1g1412 1 12976320 12976847 Aed2g0224 2 1480995 1481567 PCT