Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1400 ATGTATAGAGCTGCAGCTTCACGTCTCACCCTTCCCAAGGGCAATGGGAGAACAATGGGAGCCTCAAGAGGTTTATTCAGCTGGTTTACTGGGGAATCTTCCAATCCTCTTCCTCCTCTTGACACCCCTCTTAGAGGGGTTTCCCTGCCACCTTCACTTCCAGATTATGTTGAACCAAGCAAGACCAAGATCACAACTCTCCCCAATGGCCTAAAAATAGCATCAGAAACCTCATCAAACCCTGCTGCATCAATAGGGTTATATATTGACTGTGGTTCCCTCTATGAGATGCCATTCTCAAGTGGGGCGTCACACCTGCTAGAGAAAATGTCTTTCAAGACCACGGCAAACCGAAGTCACTTTCGTGTTGTAAGGGAAGTGGAAGCAGTTGGTGGCAATGTGGGAGCCTCTGCCTCTCGGGAGCAAATGGGCTACACTTTTGATGCTCTAAAAACTTATGTTCCACAGATGATTGAGTTGCTGGTTGACAGCGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTAGGAAGGTGAAAGCAGAGCTTGGAGAACTATCAAACAATCCCCAGGGCTTACTTTTGGAGGCAGTTCACTCTGTTGGTTATTCTGGAGCATTGGCCAATCCACTTTTGGCTTCTGAATCAGCACTGAACAGATTAAATAGCTCCATTTTAGGGGAATTTGTTGCTGAGAATTATACTGCATCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATGAAGAACTTTTATCTGTTGCTGAACCACTTCTCTCTGATCTACCAAGTGTTCCCCGCCCTGGAGAACCAAAATCTACATATGTTGGGGGAGATTTTCGTCGCCAGGGTGAATCAGGGGGTGCACATGTAGCTATTGCTTTTGAAGTGCCTGGTGGCTGGCAAAAAGAGAAAGAAGCTATTGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGGTCGTTCTCAGCTGGAGGGCCAGGCAAAGGGATGCACTCAAGGCTGTATCTTCGTGTCTTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTCTCTTCAACAACACAGGGTTATTTGGCATATATGTATACACGGGCTCTGATTTTGTGGCAAATGCTGTGGATTTAGCAGCCGGAGAATTAATAGCAATTGCATCCCCGGGACAAGTTTCACAGGTACAGCTTGATCGTGCCAAGGTATCCACAAAGTCCGCAGTTCTAATGAACTTAGAGTCCAGAATGATTGCATCAGAGGATATAGGAAGGCAGATATTGACTTATGGAGAAAGGAAGCCACTGGAACAGTTCTTAAAGTCAGTAGATGCAATCACTTTGGATGATATCACTAAAATTTCTCAGAAGATTATTTCCTCACCTCTCACTATGGCATCCTATGGAGATGTATACAATGTTCCCAGTTACGAATCCGTTAGTAGGAAGTTCCATGCAAAATGA 1476 0.4505 MYRAAASRLTLPKGNGRTMGASRGLFSWFTGESSNPLPPLDTPLRGVSLPPSLPDYVEPSKTKITTLPNGLKIASETSSNPAASIGLYIDCGSLYEMPFSSGASHLLEKMSFKTTANRSHFRVVREVEAVGGNVGASASREQMGYTFDALKTYVPQMIELLVDSVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAVHSVGYSGALANPLLASESALNRLNSSILGEFVAENYTASRMVLAASGVEHEELLSVAEPLLSDLPSVPRPGEPKSTYVGGDFRRQGESGGAHVAIAFEVPGGWQKEKEAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSLFNNTGLFGIYVYTGSDFVANAVDLAAGELIAIASPGQVSQVQLDRAKVSTKSAVLMNLESRMIASEDIGRQILTYGERKPLEQFLKSVDAITLDDITKISQKIISSPLTMASYGDVYNVPSYESVSRKFHAK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1400 491 Gene3D - 276 488 - -
Aed1g1400 491 Pfam Peptidase M16 inactive domain 229 406 IPR007863 -
Aed1g1400 491 ProSitePatterns Insulinase family, zinc-binding region signature. 92 115 IPR001431 GO:0004222|GO:0006508
Aed1g1400 491 Gene3D - 54 264 - -
Aed1g1400 491 SUPERFAMILY LuxS/MPP-like metallohydrolase 286 482 IPR011249 GO:0046872
Aed1g1400 491 Pfam Insulinase (Peptidase family M16) 73 216 IPR011765 -
Aed1g1400 491 PANTHER METALLOPROTEASE 22 490 - -
Aed1g1400 491 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 22 490 IPR037715 GO:0006627
Aed1g1400 491 SUPERFAMILY LuxS/MPP-like metallohydrolase 61 271 IPR011249 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1400 Aed-Chr1 12869752 12873779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1400 K01412 - gmx:100810996 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1400 1 12869752 12873779 Aed1g1400 1 12869752 12873779 ECH
Aed1g1400 1 12869752 12873779 Aed2g0242 2 1613563 1619032 PCT