Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1398 ATGAATTGTATCTCCAACAACAGCATGGTGGATGACAAAATCACCAAAGGAGTTTCTGGCTTCGTAGTTGAGGATGTTCCTCATCTATCTGATTACATCCCTCACCTCCCCACATATCCTGACCCGTTACAAGACAATCCTTCCTATTCTGTTGTTTCGCAATATTACGTGAATGTGGATGATACAATTGCGCAAGAGATAGTTGTACACAAAAATAGTCCAAGAGGGACCCATTTTCGTCGAGCTGGGCCAGCTCAGAAGGTATATTTTGATTCAGAGGAAGTGCACGCTTGTATTGTTACATGCGGTGGTCTTTGTCCTGGTCTAAATACAGTGATCAGAGAAATAGTATGCGGCTTATATCATATGTATGGGGTGCACAAAGTTTTGGGAATACAGGGAGGATATCCAGGTTTTTATTCTCGAAATACAGTTCCTTTGACACCAAAGGTTGTGAACGATATCCACAAACGTGGTGGAAGCATCCTTGGGACATCATATGGAGGCCATGACACCTCAAAGATTGTTGATAACATTCAGGACCGGGGCATTAATCAGGTTTATATACTTGGAGGATATGGAACTCAATATGAAGCAGCTATGATTTTTGAGGAAGTTAGAAAGCGTGGCTTGAAAGTTGCAGTGGTCGGAATTCCGAAAACTATTGACAATGATATCCCAGTTATCGACAAGTCAATTGGTTTCGACACTGCTGTTGAAGAGGCACAACGAGCAATCAATTCTGCTCATGTGGAAGCAGAAAGCGCTGAGAATGGAATTGGTGTTGTAAAATTAATGGGGCGTTACAGTGGATTTATCGCCATGTATGCAACTCTTGCGAGCCGTGATGTGGATTGTTGCCTGATTCCAGAATCGCCCTTTTACATGGAGGGTCCGGGAGGACTGTTGGAGTTCATTGAGAGAAGACTGAAAGAACAAGGTCACATGGTTTTAGTAATAGCTGAAGGTGCAGGTCAGGACCTTCTTTCTGGCAACCCATCTATTGTTCATAAGCAGGATGCTTCTGCCGACAAATTATTTCCAGATGTTGGCCTGTGGTTGTCTCAGAAAGTTAAGGATCACTTTGAAAAACGCAAAAAAATGGCTATAAATCTGAAGTACATTGATCCTACTTACATGATCCGTGCTATCCCAAGTAATGCATCTGATAATGTATACTGCACCCTCCTTGCCCAAAGTGCTGTTCATGGTGCAATGGCAGGATACACAGGCTTCACCGTGGGACCGGTTAATGGCAGAAATTGTTACATTCCATTTCATCTAATAAACGAGGGAGAAAAGAGGGTTGTGATAACTGATCGGATGTGGGCAAGGTTACTATCTTCAACCCATCAGCCAAGCTTCTTGAATCCAAAAGATATCACATTCACAGGTGACAGAGAGGAAATAACGGAAAACCAAACCGCAGATGGGCAGAACCATTCAGAAATAGCAGACTAA 1461 0.4292 MNCISNNSMVDDKITKGVSGFVVEDVPHLSDYIPHLPTYPDPLQDNPSYSVVSQYYVNVDDTIAQEIVVHKNSPRGTHFRRAGPAQKVYFDSEEVHACIVTCGGLCPGLNTVIREIVCGLYHMYGVHKVLGIQGGYPGFYSRNTVPLTPKVVNDIHKRGGSILGTSYGGHDTSKIVDNIQDRGINQVYILGGYGTQYEAAMIFEEVRKRGLKVAVVGIPKTIDNDIPVIDKSIGFDTAVEEAQRAINSAHVEAESAENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYMEGPGGLLEFIERRLKEQGHMVLVIAEGAGQDLLSGNPSIVHKQDASADKLFPDVGLWLSQKVKDHFEKRKKMAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGPVNGRNCYIPFHLINEGEKRVVITDRMWARLLSSTHQPSFLNPKDITFTGDREEITENQTADGQNHSEIAD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1398 486 PIRSF ATP_PFK_TP0108 8 460 IPR012004 GO:0003872|GO:0005524|GO:0006096
Aed1g1398 486 Pfam Phosphofructokinase 98 403 IPR000023 GO:0003872|GO:0006096
Aed1g1398 486 Gene3D - 91 281 - -
Aed1g1398 486 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 8 481 - -
Aed1g1398 486 PANTHER - 8 481 - -
Aed1g1398 486 Coils Coil 239 259 - -
Aed1g1398 486 SUPERFAMILY Phosphofructokinase 30 458 IPR035966 GO:0003872|GO:0006096
Aed1g1398 486 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 26 456 IPR012004 GO:0003872|GO:0005524|GO:0006096
Aed1g1398 486 PRINTS ATP-dependent phosphofructokinase family signature 255 271 IPR022953 GO:0003872|GO:0006002|GO:0006096
Aed1g1398 486 PRINTS ATP-dependent phosphofructokinase family signature 183 199 IPR022953 GO:0003872|GO:0006002|GO:0006096
Aed1g1398 486 PRINTS ATP-dependent phosphofructokinase family signature 312 324 IPR022953 GO:0003872|GO:0006002|GO:0006096
Aed1g1398 486 PRINTS ATP-dependent phosphofructokinase family signature 216 233 IPR022953 GO:0003872|GO:0006002|GO:0006096
Aed1g1398 486 PRINTS ATP-dependent phosphofructokinase family signature 234 252 IPR022953 GO:0003872|GO:0006002|GO:0006096
Aed1g1398 486 PRINTS ATP-dependent phosphofructokinase family signature 99 118 IPR022953 GO:0003872|GO:0006002|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1398 Aed-Chr1 12861960 12866215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1398 K00850 - gmx:100796769 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1398 1 12861960 12866215 Aed2g0243 2 1619456 1622865 PCT