Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1396 ATGATGATCAGAGTGGAGAAGGGTGTGCAGCCTGTTTTACTGAAATTTGGTTTGGCTTTGGCTCTTTCATTCGCTGGATTTCTCTACTCACGCCTCAGAACCAGAGGAGTCAAGCCCTCCAAGTCAAGCAAGGGGGGTTCTTTCGTCCCAGGTCATGATAGTGAAGTTAATTCAGGAGGAGGTATAGGGGCAGCACTCAGCACTTGCAACGCCATTTCAGAGCCAGATTTTCTATGTACTGAAGAAACATTCATCAACAGGGTGATAAGTGACAACTCTCCTATTGCTCTCTCTCCTGAAACTGACAATACACAAATTGGAGATAAAGATGAGTTCCTCCTCCTACCTGAATTTAATGATCTTGTTAAGGACGTTGACTTTGAAGCCACCATTATCAGAAATTCTTTTAAGAAAGATATGAAAGCACCATGGTTAAAAGTAGGATCTTCTATAGCATATGAAGGCCCTGAGAAGGATGACTATGAGCAAGAGGTAAGTCAACTCAGGAACATGATTAGAAGGCTTCAAGACAGGGAACAATGCCTTGAGGTTCAACTGCTCGAATACTGTGGTATAAGAGAGCAAGAAACAGTAGTGATGGAACTCCAAAATAGATTGAAAGCAAGTACTATGGAGGTAAAGATCTTCAATCTGAAGGTTAAGACCTTACAGTCTGAGAATTGGAGATTAAAGGAACAGGTTGCGGATCATGCAAAAGTGCTGGCTGAGCTTGAGACTGCAAAAGCACAAGTTGAATTGCTCAATAAGAGAATTAGGTATGAATCTGAACACAATAGGGAGCAGATCATGACTCTTAAGCAGAAAGTTTCCAGGTTGCAAGACCAAGAATGCAAAGATGCTACTTGTGATCAAGATTTTCAAATAAATATGCAAAAGCTAAAGGATCTTGAGTCCGAAGCAGAAGAGTTGAGGAAATCTAATTTAAGATTGCAGATAGAAAATTCTGATTTAGCTCAAAGATTGGATTCTACCCAGATCCTTGCAAATGCATTTCTGGAAGACCCAGAGGACTTGAACAGAAGCTTAAGCCCTACATCTGAGAAGAAGGCCAAGCAGCTTATACTTGAATATGCAAATGCTGATGAACCAGGCAACATTGTGGACTTTAATATAGACCAATGGTCCTCCTCACAAGCTTCTTCTCTCACTGATTTTGGAGAGTGTGATGATTTTTCTTCTGTTGATAATTTATCTGCTGCCAGAACTAACACAAACCAGACCAAACTTTTTGGCAAGCTTAGGCAACTGATACAAGGTAAAGGTATTAGTCATCACCATAGTCATGTTTCATCACAAGAAAAATCTGGATATCAAGATAGCAATCCTACTCGTTTGAGCGCATCAACTGGAACTGAGGGTCTTAGGAGTGAGTTTGCAACTCCCATTGCCGCATCTAGAACTTCCCTTGATTTCTCTAGTTTGACGAGTGTGAAGGAAGGTGATAGAAGAAATTCAGATAGCACTGTCATGGGAAGCTCAAATAAATTCAGTGCACTTAAAAGAGATTCCTTCTCAGATTCCTTAGGCTTGGAAAAAAATAATTTGGAGAAATATGCAGAAGCTTTAAAAGATTCTAGCACGAGTGCTACACATCAAAGACGTAGAAGATCAGCATCATGTAGTTAG 1647 0.4044 MMIRVEKGVQPVLLKFGLALALSFAGFLYSRLRTRGVKPSKSSKGGSFVPGHDSEVNSGGGIGAALSTCNAISEPDFLCTEETFINRVISDNSPIALSPETDNTQIGDKDEFLLLPEFNDLVKDVDFEATIIRNSFKKDMKAPWLKVGSSIAYEGPEKDDYEQEVSQLRNMIRRLQDREQCLEVQLLEYCGIREQETVVMELQNRLKASTMEVKIFNLKVKTLQSENWRLKEQVADHAKVLAELETAKAQVELLNKRIRYESEHNREQIMTLKQKVSRLQDQECKDATCDQDFQINMQKLKDLESEAEELRKSNLRLQIENSDLAQRLDSTQILANAFLEDPEDLNRSLSPTSEKKAKQLILEYANADEPGNIVDFNIDQWSSSQASSLTDFGECDDFSSVDNLSAARTNTNQTKLFGKLRQLIQGKGISHHHSHVSSQEKSGYQDSNPTRLSASTGTEGLRSEFATPIAASRTSLDFSSLTSVKEGDRRNSDSTVMGSSNKFSALKRDSFSDSLGLEKNNLEKYAEALKDSSTSATHQRRRRSASCS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1396 548 Coils Coil 293 327 - -
Aed1g1396 548 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 344 548 IPR040265 -
Aed1g1396 548 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 2 343 IPR040265 -
Aed1g1396 548 Coils Coil 262 282 - -
Aed1g1396 548 MobiDBLite consensus disorder prediction 440 461 - -
Aed1g1396 548 Coils Coil 192 212 - -
Aed1g1396 548 MobiDBLite consensus disorder prediction 428 461 - -
Aed1g1396 548 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 344 548 - -
Aed1g1396 548 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 2 343 - -
Aed1g1396 548 Coils Coil 237 257 - -
Aed1g1396 548 MobiDBLite consensus disorder prediction 528 548 - -
Aed1g1396 548 Coils Coil 158 185 - -
Aed1g1396 548 MobiDBLite consensus disorder prediction 480 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1396 Aed-Chr1 12851588 12854658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1396 - - gmx:100819899 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1396 1 12851588 12854658 Aed1g1396 1 12851588 12854658 ECH
Aed1g1396 1 12851588 12854658 Aed2g0245 2 1629301 1631762 PCT