Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1379 ATGGGGAGTGGAATGGTGGTGATATTTGACTTCGACAAGACGATAATCGAGTGTGATAGCGACAACTGGGTTGTTGATGAGTTGGGTTTGAACGATTTGTTCAATCAACTCCTTCCCACAATGCCTTTGAACACTCTCATGGATAGGATGATGATGGAGCTTCATTCCCATGGAAAAACCCTTGAGGACATTCTTCATGTTCTTCAGAGGATTCCTATACACCCCAGAATAATCCCTGCTATCAAAGCCGCTCATGCTTCAGGCTGTGATTTGAGGATTGTAAGCGATGCAAACACTTTCTTCGTCGACACTCTTTTGAACCACTTTGGAATTAGGGAATGCTTCTCAGAGATTAACACCAACCCTAGTTATTTTCACCATCAGGGAAGGTTAACAATTTTGCCTTACCATGACTTTAATAAATCTCCACATGGATGCTCTTTGTGCCCTCCAAACATGTGCAAGGGTCTAATAGTTGAGAGAATCCAGAACTCAATAATATCTGCTGGAGAAAGCAAGAGGTTCATCTACATTGGAGATGGTGGTGGAGACTACTGCCCAAGCTTGAGGCTTAAAGAACAAGACTTTGTGATGCCAAGGAAGAACTTTCCCGTGTGGGACTTAATATCTAAAGACCCTTTACTTGTTAAAGCTCAAATCCATGAATGGAATGATGGACAAGACTTTGAACAATTGAGAAGTACTGTGTACCAAATCATGGGATGCGCGAAAGTATAA 738 0.4201 MGSGMVVIFDFDKTIIECDSDNWVVDELGLNDLFNQLLPTMPLNTLMDRMMMELHSHGKTLEDILHVLQRIPIHPRIIPAIKAAHASGCDLRIVSDANTFFVDTLLNHFGIRECFSEINTNPSYFHHQGRLTILPYHDFNKSPHGCSLCPPNMCKGLIVERIQNSIISAGESKRFIYIGDGGGDYCPSLRLKEQDFVMPRKNFPVWDLISKDPLLVKAQIHEWNDGQDFEQLRSTVYQIMGCAKV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1379 245 PANTHER PHOSPHATASE, ORPHAN 1, 2 4 234 IPR016965 GO:0016791
Aed1g1379 245 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 201 IPR006384 GO:0016791
Aed1g1379 245 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
Aed1g1379 245 Gene3D - 3 191 IPR023214 -
Aed1g1379 245 SUPERFAMILY HAD-like 6 200 IPR036412 -
Aed1g1379 245 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 189 - -
Aed1g1379 245 Pfam Putative Phosphatase 5 231 IPR016965 GO:0016791
Aed1g1379 245 PANTHER INORGANIC PYROPHOSPHATASE 4 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1379 Aed-Chr1 12743881 12745300 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1379 K13248 - gmx:100801052 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0283 2 1844379 1846332 Aed1g1379 1 12743881 12745300 ECH
Aed1g1379 1 12743881 12745300 Aed1g1379 1 12743881 12745300 ECH
Aed2g0284 2 1847896 1849164 Aed1g1379 1 12743881 12745300 PCT