Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1374 ATGACCAACTACGGCACAATTCCAACCTCCTCCTCGCCTTCGACGAACCTGGAGTTCATCTCACGCGCCAAGCAGCGCGTGAAGGAAGGCCTCGGAACCCGCCGTCCATGGAAGATCATGTTCAATTTCCGATCCTTCGGACTCCCTGCGGGCCTCGGAGACGCCGTCGCGCGCGTGAAGGAGAACATCTCCTACTTCCAGATGAACTACGCGATCCTCGTGCTTCTCGTTCTGTTCCTGAGCCTGCTGTGGTTTCCAATCTCGCTGATCGTCTTCGTCGTGCTCATGGCGGCGTGGCTCATCCTCTACTTCTTCCGCGACGAACCGCTCACCATCTTCGGGAGGTTAATCAGCGACCGCCTGGTGCTTATCGTGATGGCGGTGCTCACTGTCGTGCTGCTTCTTCTCACCGGCGCCATCGGCAACATCCTGGTGGCGCTTCTGATCGGAGTTGTGTTGGTGCTGCTGCACGCCGCCTTGAGGAAAACCGATGATTTGTTCCTTGACGAAGAAGAGGCCACTGGATTCTCTCCTCCCGGTGCACCTCTTTCTTGA 555 0.5748 MTNYGTIPTSSSPSTNLEFISRAKQRVKEGLGTRRPWKIMFNFRSFGLPAGLGDAVARVKENISYFQMNYAILVLLVLFLSLLWFPISLIVFVVLMAAWLILYFFRDEPLTIFGRLISDRLVLIVMAVLTVVLLLLTGAIGNILVALLIGVVLVLLHAALRKTDDLFLDEEEATGFSPPGAPLS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1374 184 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 177 IPR004895 -
Aed1g1374 184 Pfam PRA1 family protein 31 171 IPR004895 -
Aed1g1374 184 PANTHER PRA1 FAMILY PROTEIN F2 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1374 Aed-Chr1 12719422 12719976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1374 K20359 - gmx:100788152 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1374 1 12719422 12719976 Aed1g1374 1 12719422 12719976 ECH
Aed1g1374 1 12719422 12719976 Aed2g0293 2 1901272 1901826 PCT