Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1352 ATGGGAATGTTTGCGGTAAACAAGGAAGGAGAGGTGACAGTGAGCTTCAAGAACGATATAAACTTGAATGCTTTCTATAAGCCTCAACAATTGAAGTTCAAGAGAAGGAAGGTGGCAAGTCTGAATCTGAAGCTCCAAAACACATTCTCATTCAACAAACGAAGCCTCGCAGTTTTGTCACCAAAACCTGAACTAATGCTTCTTCCAACTTCCCCTGCCCAGCTTGATTTAGCTGCAATAATGGTTCAGAAAGTTTACAGGAGTTACAGGATTAGAAGAAATCTGGCTGATTGTGCAGTTGTTTGTGAGGAGCTATGGTGGAAGGATTCAGTGATGACTGCTTTTAACAAGTGCTCCATATCCCATCTTGACTCTGATAAATCAGAAACAACCATTTCAAAATTGGCACGAGCTAGGATGATGGCTGCTGAGATTGATCCCCGTCATCGTTATGGCCACAATCTTCATTTCTACTACTTAGTCTGGTTTCATAGCCAGAGTCGTCAGCCTTTTTTCTACTGGTTGGATGTTGGGAATGGCAAAGAAGTAACTCTTGAAGCATGTCCTAGAAGGCAATTGCAAAGACAGTGCATAAAATACCTTGGACCCGAAGAGAGGGAAGCATATGAAGTGATTGTGGAGGGAGGGAGGCTAGTTTATAGAGAAAGCAGGGAGCTTGTGCACACTACCGAGGATTCCAAGTGGATTTTTGTCTTGAGCACATCTAGAATTTTGTACGTTGGGCAGAAGAACAAAGGTCAATTTCAGCACTCCAGTTTTCTAGCTGGTGCTGCTACCATTGCATCCGGAAGATTGGTGGCTCAAAATGGACTTCTTCATGCTATATGGCCCTATAGTGGTCACTACCGTCCAACAGAGAAGAATTTTATGGAATTCATTAGCTTCTTGGAAGAACACAAAGTGGATATGGCAAATGTAAAGAAATATGCAATTGATGAAGATGTCCAACCTTCTAAACCTGTGAATGAGTGCATGGAAGGCAATGCTTCAGTTGAAGAAGAAGAGAACAAGCCAATGTCAAGCAAATGGAGTACTGGAATAGGTCCTCGGATTGGTTGTGTGAGAGAGTATCCAACAAAATTTCAAGTTGAGGCACTTGAACAGCTCAATCTTTCACATTCATCTAGAGACAACCATGAAACATTTGCAGACAAAGCACCTATTCCCTCTCCGAGGCCTAATGCAAAACATTTGTCGCCTAGGCTTGTCAACATGGGACTTCCTATCCCAATCCTACATCTACATGTTTCTTTTTAG 1278 0.4233 MGMFAVNKEGEVTVSFKNDINLNAFYKPQQLKFKRRKVASLNLKLQNTFSFNKRSLAVLSPKPELMLLPTSPAQLDLAAIMVQKVYRSYRIRRNLADCAVVCEELWWKDSVMTAFNKCSISHLDSDKSETTISKLARARMMAAEIDPRHRYGHNLHFYYLVWFHSQSRQPFFYWLDVGNGKEVTLEACPRRQLQRQCIKYLGPEEREAYEVIVEGGRLVYRESRELVHTTEDSKWIFVLSTSRILYVGQKNKGQFQHSSFLAGAATIASGRLVAQNGLLHAIWPYSGHYRPTEKNFMEFISFLEEHKVDMANVKKYAIDEDVQPSKPVNECMEGNASVEEEENKPMSSKWSTGIGPRIGCVREYPTKFQVEALEQLNLSHSSRDNHETFADKAPIPSPRPNAKHLSPRLVNMGLPIPILHLHVSF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1352 425 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 145 413 IPR044159 -
Aed1g1352 425 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 1 144 IPR044159 -
Aed1g1352 425 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 145 413 - -
Aed1g1352 425 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1352 Aed-Chr1 12564943 12567228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1352 - - gmx:100786055 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1352 1 12564943 12567228 Aed1g1352 1 12564943 12567228 ECH
Aed2g0323 2 2118800 2122229 Aed1g1352 1 12564943 12567228 PCT